Paraburkholderia dioscoreae: PDMSB3_3822
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Entry
PDMSB3_3822 CDS
T08115
Symbol
pyrF
Name
(GenBank) Orotidine 5'-phosphate decarboxylase
KO
K01591
orotidine-5'-phosphate decarboxylase [EC:
4.1.1.23
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00240
Pyrimidine metabolism
pdio01100
Metabolic pathways
pdio01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PDMSB3_3822 (pyrF)
Enzymes [BR:
pdio01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.23 orotidine-5'-phosphate decarboxylase
PDMSB3_3822 (pyrF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OMPdecase
GARS_C
Motif
Other DBs
NCBI-ProteinID:
VVD30278
UniProt:
A0A5Q4ZPI9
LinkDB
All DBs
Position
I:complement(3919048..3919863)
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AA seq
271 aa
AA seq
DB search
MSHFIQTLNDAWQRTNSLLCVGLDPEPTKFPGALAGRPEAIFDFCRAIVDATAPYASSFK
PQIAYFAAHRAEDQLEQLIAHIHANHPGLPVILDAKRGDIGSTAEQYAREAFERYQADAV
TVNPYMGFDSIQPYLEHEGKGVIVLCRTSNAGGSDLQFLETGGRPLYQVVAQLAADKWNA
SGQLGLVVGATFPKEIEVVRGIVGDMPLLIPGIGAQGGDVQATVNAGRTANGTGMLINSS
RAIIYAGKGDDFAQAAAKAAMETRDRINAFR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatttcatccagacactcaacgacgcctggcagcgcaccaactcgctgctgtgc
gtcggcctcgatcccgagcccactaaattcccgggcgcgctcgcgggccgtcccgaggcg
attttcgacttctgccgcgcgatcgtcgacgcgaccgcgccgtacgcgtcgtcgttcaaa
ccgcagattgcctacttcgcggcgcatcgcgcggaagaccagctcgagcagttgatcgcc
cacattcatgcgaaccatccgggcttgccggtcattctcgatgcgaagcgcggcgacatc
ggcagcaccgccgagcaatatgcgcgcgaggcgttcgagcgctatcaggccgacgcggtg
acggtgaatccttacatgggtttcgattcgatccagccgtatctggagcacgaaggcaaa
ggcgtgatcgtgctgtgccgcacgtcgaacgcgggtggctccgatctgcaattcctggaa
acgggtgggcgtccgctctatcaggtcgtcgcgcaactggcggcggacaaatggaatgcg
agcggtcagctggggctggtggtcggcgcgacgttcccgaaggaaatcgaagtggtgcgt
gggattgtcggcgatatgccgctgctgattccgggcatcggcgcgcaaggcggcgacgtg
caggcaacggtcaacgccggccgcaccgcgaacggcacgggcatgctgatcaactcgtcg
cgggcgattatctatgcgggcaagggcgacgatttcgcccaagccgcggcgaaggccgcg
atggaaacgcgcgaccggatcaacgcgttccggtaa
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