Paraburkholderia dioscoreae: PDMSB3_3902
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Entry
PDMSB3_3902 CDS
T08115
Symbol
fadD
Name
(GenBank) acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio00061
Fatty acid biosynthesis
pdio00071
Fatty acid degradation
pdio01100
Metabolic pathways
pdio01212
Fatty acid metabolism
pdio02024
Quorum sensing
pdio04146
Peroxisome
Module
pdio_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PDMSB3_3902 (fadD)
00071 Fatty acid degradation
PDMSB3_3902 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PDMSB3_3902 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PDMSB3_3902 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pdio01004
]
PDMSB3_3902 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdio04147
]
PDMSB3_3902 (fadD)
Enzymes [BR:
pdio01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PDMSB3_3902 (fadD)
Lipid biosynthesis proteins [BR:
pdio01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PDMSB3_3902 (fadD)
Exosome [BR:
pdio04147
]
Exosomal proteins
Exosomal proteins of breast milk
PDMSB3_3902 (fadD)
Exosomal proteins of breast cancer cells
PDMSB3_3902 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
VVD30358
UniProt:
A0A5Q4ZPN6
LinkDB
All DBs
Position
I:complement(4002512..4004185)
Genome browser
AA seq
557 aa
AA seq
DB search
MDKIWLKSYPPGVPAEIDPTRYSSVGELLEEAFRDHRAKPAFVCMGKEISYGELDALSRK
LAAWFQSKGLARGARIAIMMPNVLQYPVAIAAILRAGYVVVNVNPLYTPRELEHQLKDSD
AEAIILLENFAVTLQAIVRNTSIKHVVVAAMGDLMGLKGTLVNFVVRKVKKMVPAWSLPG
HVKFNTAIAEGGRQNFKPVQQGPNDVAFLQYTGGTTGVAKGATLLHRNLIANVLQSEVWL
DPVRANRTDIDQFITVVALPLYHVFALTVCGLLTIRTGGLGVLIPNPRDIPGMIKALEGY
AITTIPAVNTLYNAMLNSPDFHKLDFSKLIAANGGGMAVQEAVAKRWYEQTHTPIIEGYG
LSETSPCVTCNPVTVTEYSGTIGLPLPSTEISIRDDEGNEVPLGQPGEICIRGPQVMAGY
WNRPDETAKVMTEDGFFKSGDVGLMNEGGFVKIVDRKKDMILVSGFNVYPNEIEDVVAKL
PGVFEVAAVGVPDQHSGEAVKLFVVKKDQALTDADIFAYCKQQLTGYKRPKIVEFRTELP
KSNVGKILRRELRDGRA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaatctggctgaaatcttatccacccggcgttcccgcagagattgacccaacc
cgctactcgtcggtcggagaactgctcgaagaagcctttcgcgaccaccgcgccaagccc
gcgttcgtctgcatgggcaaggaaatcagctatggcgagctcgacgcgctttcgcgcaag
ctggcagcgtggtttcaatcgaagggcctggcccgcggcgcgcgcatcgcgatcatgatg
ccgaacgtgctgcaatatccggtggcgattgccgctattctgcgcgcgggctacgtggtc
gtgaacgtgaacccgctttataccccgcgtgagttagagcatcagctaaaggacagcgac
gcggaagcgatcattctgctcgagaacttcgcggtcacgctgcaggcgatcgtacgcaac
acgtcgatcaagcatgtggttgtagccgcgatgggtgatctgatgggcctgaagggcacg
ctggtgaacttcgtcgtgcgcaaggtgaaaaagatggtgccggcgtggagcctgccgggt
cacgtcaaattcaataccgcgatcgcggaaggtggacgtcagaatttcaagccggtccag
caaggtccgaacgatgtcgcgtttctccagtacacgggcggcacgacgggcgtagccaag
ggcgcgacgctgctgcatcggaacctgatcgccaacgtgttgcagtcggaagtctggctc
gatccggtgcgcgcgaatcgtacggacatcgatcagttcatcaccgtggttgccttgccc
ctgtatcacgtgtttgcgctgacggtttgcgggttgctgacaatccgtaccggcggcctc
ggcgtgctgattcctaatccgcgcgacattccgggcatgatcaaagcgcttgaagggtat
gcaatcacgacaattcccgccgtcaacacgctctacaacgcgatgttgaatagcccggat
ttccataagctcgatttttcgaagctgatcgccgcgaacggtggtggtatggcggtgcag
gaggctgtagccaagcgctggtacgagcagacgcacacgccgatcattgaaggctacggg
ttgtcggaaacgtcgccgtgcgtgacctgcaatccggtgaccgtcaccgaatacagcggg
acaatcggcttgccgctgccgtcgacggaaatctcgattcgagacgacgaaggcaacgaa
gtgccgctcggccagccgggtgaaatctgcatccggggcccgcaggtaatggcgggttac
tggaaccggcccgacgaaacggcaaaagtgatgacggaggatggcttctttaaatcgggc
gatgtcggcctgatgaacgaaggtggcttcgtcaagatcgtcgaccgcaagaaggacatg
attctggtgtccggcttcaacgtctatccgaacgaaatcgaagacgtggtcgccaaactg
ccgggcgtgttcgaagtcgccgcggtcggcgtgccggatcagcattcgggcgaggcggtg
aaactgttcgtcgtgaagaaagatcaggcactcaccgatgcggacatctttgcgtactgc
aagcagcaactgaccggttacaagcggccgaagatcgtcgaattccgtaccgaactgccg
aagagcaacgtcggcaagatcctgcgccgcgagttgcgcgacgggcgcgcgtaa
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