Paraburkholderia dioscoreae: PDMSB3_3927
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Entry
PDMSB3_3927 CDS
T08115
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PDMSB3_3927 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdio03400
]
PDMSB3_3927 (ung)
Enzymes [BR:
pdio01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PDMSB3_3927 (ung)
DNA repair and recombination proteins [BR:
pdio03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PDMSB3_3927 (ung)
Prokaryotic type
PDMSB3_3927 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
VVD30377
UniProt:
A0A5Q4Z8F5
LinkDB
All DBs
Position
I:4029209..4030048
Genome browser
AA seq
279 aa
AA seq
DB search
MTSASPTRPNPSQASLFGEAASQPSTDMTTTPQKSGASAPPPTLEAQFDALPPAWRAHLK
PFIESDAYTPLCRFVDGERAAGKTVYPADVFRALRLTSPDEVKVVILGQDPYHGEDRGTP
QAHGLAFSVAPNVRTPPSLRNIFKEIAASLGHETPRHGCLDTWAKQGVLLLNTVLTVERD
SAASHAKRGWEKCTDTLIHELAMRHDGLVFMLWGAHAQAKRALLGGKSHCVLEAPHPSPL
SAHRGFLGCGHFAKANEYLAQHGREPIDWRLPHEAQMLA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgcttcccccacccgccccaatccgtcgcaagcttcgctgttcggcgaggcc
gcctcccaaccgtctactgacatgacgaccacgccgcagaaatccggcgccagcgcgccg
ccgccaacgctcgaggcgcaattcgacgcgctgccgccggcatggcgcgcacatctcaaa
ccgttcatcgaaagcgacgcctatacgccgctctgccgcttcgtcgatggtgagcgcgcc
gccggcaaaaccgtctatcccgccgacgtattccgcgcgctgcgcctgaccagtcccgat
gaagtgaaagtggtgatcctcggccaggatccgtaccacggcgaagaccgcggcacgccg
caggcgcacgggctcgcattttcggtggcgccgaacgtgcgcacgccgccgtcgctgcgc
aacatcttcaaggagattgccgcaagccttggccacgagacgccgcgtcacggctgtctc
gacacctgggcgaagcagggcgtgctgctgctgaacacggtgttgacggtagagcgcgac
tcagccgccagccacgcaaaacgcggctgggaaaaatgcaccgacacgctgatccacgaa
ctggcgatgcgccatgacggcctcgtgttcatgctgtggggcgcgcacgcgcaagccaag
cgcgcgctgctcggcggcaagtcgcattgcgtgctggaagcaccgcatccgtcgccgctg
tcggcgcatcgcggttttctcggctgcgggcatttcgccaaagccaacgaatatctcgca
cagcacggccgcgagcctatcgactggcgcctgccccacgaagcgcaaatgctcgcctga
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