Paraburkholderia dioscoreae: PDMSB3_3979
Help
Entry
PDMSB3_3979 CDS
T08115
Name
(GenBank) Periplasmic serine endoprotease DegP-like
KO
K04772
serine protease DegQ [EC:3.4.21.-]
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdio01002
]
PDMSB3_3979
Peptidases and inhibitors [BR:
pdio01002
]
Serine peptidases
Family S1: chymotrypsin family
PDMSB3_3979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
Trypsin
PDZ_2
PDZ_6
PDZ
Peptidase_S46
PDZ_Tricorn
DUF460
Motif
Other DBs
NCBI-ProteinID:
VVD30429
UniProt:
A0A5Q4ZFN4
LinkDB
All DBs
Position
I:4074514..4075737
Genome browser
AA seq
407 aa
AA seq
DB search
MLRRFWLFFAQAVTVLLALMFIVATLKPQWLQRQGQFGKQLAEPIVALREVAPGIGSGPA
QASYADAAQKAMPAVVNVFSSKDGSLPPDPRAKDPLFRYFFGDKNNRKQQEQPASNLGSG
VIVSSEGYILTNQHVVDGADQIEIALADGRTTNAKVIGIDPETDLAVLKVNMTNLPTITL
GRMDQTRVGDVVLAIGNPFGVGQTVTMGIVSALGRNHLGINTFENFIQTDAAINPGNSGG
ALVDVNGNLLGINTAIYSRSGGSLGIGFAIPVSTARSVLESIITTGSVTRGWIGVEPQDV
TPEIAESFGLDQKSGAIVAGVLKNGPADRAGIKPGDILVSVNGQEITDTTRLLNVIAQIK
PGTAAKVHLVRKSREMDLDVTIGKRPPPPKQPVEDNGGSDQQDDDGG
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcttagacgcttttggctgttctttgcccaagcggtgaccgtgctgttggcgctcatg
ttcatcgttgcgactctcaaaccgcagtggctgcagcgtcaggggcaattcggcaagcaa
ctcgccgaaccgatcgtcgccctgcgggaagtggcgccaggtatcggcagcggcccagcc
caggcgtcgtatgcagacgccgcgcaaaaggccatgccggcggtcgtcaacgtgttctcc
agcaaggatggctcactgccgcccgacccgcgcgcgaaagatccgctgttccgctacttt
ttcggcgacaagaacaatcgcaagcagcaggagcagcccgcatccaatctcggctccggc
gtgatagtgagttcggaaggttacattctaacgaaccagcacgtcgtggacggcgccgac
cagatcgaaatcgcgctggccgacggccgcaccacgaatgcgaaggtcatcggtatcgac
ccggaaacggatctggccgtgctcaaggtcaacatgaccaatctgcccaccatcacgctc
ggccgtatggatcagacgcgcgtcggcgacgtggtgctggcgatcggcaatccgttcggc
gtcggccagacggtgacaatgggcatcgtcagcgcgctcgggcgcaatcacctcggcatc
aacacgttcgaaaactttattcagaccgatgcggccatcaacccgggcaactcgggtggc
gcactggtcgacgtgaacggcaacctgctcggcatcaacaccgccatctattcgcgctca
ggtggctcgctcggcattggcttcgcgattcccgtgtcgaccgcgcgcagcgtgctggag
agcatcatcaccacgggttcggtcacgcgcggctggatcggcgtcgaaccgcaggacgtc
acgccggagatcgcggaatcgttcgggctggatcagaagtcgggggcgattgtcgcgggc
gtattgaagaacggacccgcggaccgtgcgggcatcaagccgggcgatattctcgtgagc
gtgaacgggcaggagatcaccgacactacgcgcctgctgaacgtgatcgcgcagatcaag
ccgggtacggctgcaaaggtgcatctggtgcgcaagagccgcgagatggatctggacgtc
accatcggcaagcgtccgcctccgccgaagcaaccggttgaggataatggcggcagtgat
cagcaggatgatgatgggggttga
DBGET
integrated database retrieval system
