Paraburkholderia dioscoreae: PDMSB3_4152
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Entry
PDMSB3_4152 CDS
T08115
Symbol
cca
Name
(GenBank) fused tRNA nucleotidyl transferase; 2'3'-cyclic phosphodiesterase and 2'nucleotidase and phosphatase
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdio03016
]
PDMSB3_4152 (cca)
Enzymes [BR:
pdio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
PDMSB3_4152 (cca)
Transfer RNA biogenesis [BR:
pdio03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
PDMSB3_4152 (cca)
Prokaryotic type
PDMSB3_4152 (cca)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
TetR_C_7
Motif
Other DBs
NCBI-ProteinID:
VVD30596
UniProt:
A0A5Q4ZH92
LinkDB
All DBs
Position
I:complement(4231795..4233027)
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AA seq
410 aa
AA seq
DB search
MNIYAVGGAIRDELLGVPVQDRDYVVVGATPEQMVAQGYRPVGKDFPVFLHPQTHEEYAL
ARTERKTAAGYHGFQFFYAPDVTLEEDLARRDLTINAMAREVRPDGELTGPVIDPFNGQG
DLQARLFRHVSDAFLEDPVRILRIARFAARFVDFTVAPETLALMRKMVADGEVDALVAER
VWQEVSRGLMEKKPSRMFEVLRECGALARILPEIDALFGVPQRADYHPEVDTGVHVMMVV
DHAAQQGYTLPVRFAALTHDLGKATTPEDVLPRHIGHEGRSVDLLKPLCERLRVPNDCRD
LALLVAREHGNIHRVMEMGAAALVRLIERSDAIRKPARFAEALQACEADARGRLGFEMRD
YPQAERLRVALVAARGVDAGAVAKRLADAPAGIKDAVHQERVRAVEAVLG
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctatgcagtaggcggcgcgatccgcgacgagttactgggcgtaccggtgcag
gatcgtgattacgtggtagtcggcgccacgccggagcagatggtcgcgcaaggctaccgt
ccggtgggcaaggattttccggtgttcctgcatccgcagacgcatgaggagtacgcgctc
gcccgcactgagcgcaagacggcggccggctatcacggtttccagtttttctatgcgccg
gatgtcacgctggaagaagacctcgcgcgccgcgatctgaccatcaacgcaatggcgcgc
gaagtgcgtccggacggcgagttgaccggcccggtgatcgacccgttcaatggccagggt
gatttgcaggcgcgcctcttccgccacgtcagtgacgcgtttctcgaagaccccgtgcgg
attttgcggatcgcccggtttgcggcccgctttgtggacttcaccgtcgcgccggagacg
ctggcgctcatgcgcaagatggtggccgacggcgaagtggacgcgctggtggccgaacgc
gtgtggcaggaagtgtcgcgcggtctgatggaaaagaagccgtcgcgcatgttcgaggtg
ctgcgcgagtgcggtgcgctggcgcggattctgccggaaatcgacgcgctgttcggcgtg
ccgcagcgcgccgactatcatcccgaagtggacacgggcgtgcacgtgatgatggtagtc
gaccatgcagcgcagcagggttatacattgccggtccggtttgcggcgctgacgcatgac
ctcggcaaggcgaccacgcccgaagacgtgttgccgcggcatatcggccacgaagggcgc
agtgtggatctgctgaagcctttatgcgagcggctgcgcgtgccgaacgattgccgcgat
ctcgcgctgctggttgcgcgcgagcacggcaacattcatcgcgtgatggaaatgggtgct
gctgcgctggtgaggctgatcgagcgcagcgacgcgatccgcaaacccgcgcgctttgct
gaagccttgcaggcctgtgaagccgatgcccgtgggcggctggggtttgagatgcgggac
tatccgcaggctgagcggttgagagtggcgctcgtcgcggcgcggggcgtggatgccggc
gccgtggccaaacggctcgccgacgcgccggccggcatcaaggacgccgtgcatcaggag
cgggtccgggccgtggaagcggtcctcggctaa
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