Paraburkholderia dioscoreae: PDMSB3_4155
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Entry
PDMSB3_4155 CDS
T08115
Name
(GenBank) Soluble lytic murein transglycosylase-like protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdio01011
]
PDMSB3_4155
Enzymes [BR:
pdio01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PDMSB3_4155
Peptidoglycan biosynthesis and degradation proteins [BR:
pdio01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PDMSB3_4155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
VVD30599
UniProt:
A0A5Q4Z8R8
LinkDB
All DBs
Position
I:complement(4234741..4236747)
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AA seq
668 aa
AA seq
DB search
MLCLGSIRAPETTMSKRLYRVYRAAGLALAAAALVACSTASAVKPLPLSQLTNDDQIFVQ
LREAARSNDAARAAQLASMIPSYPAPSYLEYFQIKPQLFDSGGHARVDAPDAPVLSFLQK
YDGQAIADRLRNDYLTVLGARHDWRNFDQQYARFVLNDDTQVKCYALESRASRGENVADA
ARALLVDPKWYGDGCVDLINALAINQQFSSTDVWQQIRLAYEQNYTNTGAKLVDALSNQP
PDPVLFNQATTTPPLLLARGVGPDTQSHQLALLAITRMARNDPAMAAATFASVAPSLSSP
ERAIGWGTIAYQAAAKQMPGAVDWYRLSVNAPLSNPAYEWRTRTALLAGDWTMVRWSIEQ
MPAALRNQPSWVYWHARALKQAGDTSTANQEFESISQGYNFYGQLAAEELGQKITVPPKT
TVTDAEVQQAGNTPGFDLAQRFYALNLRLEGNREWNWPLRTMSDRQLLATAEYARRIQLY
DRTVNTADRTKTEHDFSLRYLSPFKDIVERDSQSNGLDVEWAYGLIRQESRFIMNARSEV
GASGLMQLMPGTAQLVAKKIGLGPISREQMNDINTNILLGTNYLSMIYNQFDGSAVLATA
GYNAGPGRPRSWRQSLQHPVEGAIFAEAIPFQETRDYVKNVLSNTVYYAALFEGRPQSLK
ARLGYIAP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgctatgcttgggttcaattcgcgctccagaaacaacgatgtcaaaacgcctttaccga
gtatatcgcgcggccggtctggcgcttgccgccgcggcactcgtcgcgtgcagcacggcc
tccgccgtcaagccccttcctctttcgcaactcacgaacgacgaccagatcttcgttcaa
ctgcgcgaggcggcccgcagtaacgacgcggcgcgcgccgcgcagttggcgagcatgatc
ccgagctatccggcgccttcatatctggagtacttccagatcaagccgcagctgttcgat
tctggcgggcacgcacgggtcgacgcgccggacgcgccggtgctgagcttcctgcagaag
tacgacggccaggcgatcgccgaccgcttgcgcaacgactatctcacggtgctaggtgcg
cggcacgactggcgcaatttcgatcagcaatacgcccgcttcgtgctgaacgacgacacg
caggtgaagtgctacgcgctcgaatcgcgcgcctcgcgcggcgagaacgtggccgacgcg
gcccgcgcgctgctcgtcgatccgaaatggtacggcgacggctgcgtggatctgatcaac
gcgctcgccatcaaccagcagttcagttccaccgacgtgtggcaacagatccgcctcgcc
tacgaacagaactacaccaacacgggcgcgaagctcgtcgacgcgctcagcaaccagccg
cccgacccggtgctgttcaatcaggccaccaccacgccgccgttgctgctggcgcgcggt
gtcgggccggatacgcagtcgcatcagctcgcgttgctggccatcacgcgcatggcgcgc
aacgacccggccatggccgcggccacgttcgcgtcggtggcgccgtcgctgagttcgccg
gagcgcgccatcggctggggcacgattgcttatcaggcagcggccaagcagatgccgggc
gcggtggactggtatcgcctgtcggtgaatgcgccgctgtcgaacccggcgtatgaatgg
cgcacccgcaccgccttgctcgcgggcgactggacgatggtgcgctggtcgatcgaacag
atgccggcggcgctgcgcaatcagccgtcgtgggtgtattggcatgcacgcgcgctcaag
caggcgggcgacacgagcacggccaaccaggaattcgagtcgatctcgcagggctacaac
ttctacggccagttggccgcggaagaattaggccagaagatcacggtcccgccgaaaacc
acggtgaccgacgccgaagtgcaacaggccggcaacacgcccggcttcgatctggcgcag
cgcttctatgcgctgaatctgcggctcgaaggcaatcgcgaatggaactggccgctgcgc
accatgagcgaccggcaactgctcgccaccgccgaatacgcacgccgtatccagctgtat
gaccgcaccgtcaacacggcggaccgcacgaagaccgagcacgatttctcgctgcgttat
ctgtcgccgttcaaggatatcgtcgagcgcgattcgcagtcgaatgggctggatgtggaa
tgggcctatggcctgattcgccaggagtcgcgcttcatcatgaatgcgcgctcggaagtc
ggcgcgagcggtttgatgcagttgatgccgggcaccgcgcaactggtcgcgaagaagatc
ggcctgggtccgatctcgcgcgaacagatgaacgacatcaacaccaatatcctgctgggc
acgaactatctgtcgatgatctacaatcagttcgacgggtccgccgtgctggccaccgca
ggctataacgcagggcccggccgtccgcgtagctggcggcaatcgttgcagcatccggtg
gaaggcgcgatcttcgccgaggcgattccgttccaggaaacgcgcgactacgttaagaat
gtgttgtccaacacggtctactatgcggcattgttcgaaggccgtccgcaatcgctgaag
gcgcgtctgggttacatcgcaccgtaa
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