Paraburkholderia dioscoreae: PDMSB3_4245
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Entry
PDMSB3_4245 CDS
T08115
Name
(GenBank) Histone family protein nucleoid-structuring protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
pdio
Paraburkholderia dioscoreae
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdio03036
]
PDMSB3_4245
03400 DNA repair and recombination proteins [BR:
pdio03400
]
PDMSB3_4245
Chromosome and associated proteins [BR:
pdio03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
PDMSB3_4245
DNA repair and recombination proteins [BR:
pdio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PDMSB3_4245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS
DUF5865
FlxA
HalX
Motif
Other DBs
NCBI-ProteinID:
VVD30689
UniProt:
A0A5Q4Z8W7
LinkDB
All DBs
Position
I:complement(4324184..4324486)
Genome browser
AA seq
100 aa
AA seq
DB search
MSQYADLKAQIAKLQAQAEEARRTEIDNVVADIRQKIAEYGLTAQDLGFAVAAKRGRPPK
KAPLPAKYQDPKSGNTWSGRGKPPKWIVGKNRERFLIGAA
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatatgcagacctcaaggcgcagatcgctaaattgcaggcacaagcagaagaa
gcgcggcgtactgaaattgacaacgtggtcgctgacatccgccaaaagatcgctgaatac
ggtctgaccgctcaagatcttggctttgccgtcgccgccaagcgcgggcgcccgcccaag
aaggcgccgctgccggcgaaataccaggatcccaaatcgggaaatacatggagcgggcgc
ggcaaaccgcccaagtggatcgtcggcaagaatcgcgagcgctttctgattggcgcggct
tga
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integrated database retrieval system
