Paraburkholderia dioscoreae: PDMSB3_4290
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Entry
PDMSB3_4290 CDS
T08115
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PDMSB3_4290 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdio03400
]
PDMSB3_4290 (priA)
Enzymes [BR:
pdio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PDMSB3_4290 (priA)
DNA repair and recombination proteins [BR:
pdio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PDMSB3_4290 (priA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_30
AAA_16
ADDB_N
DUF5817
DUF8594
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
VVD30734
UniProt:
A0A5Q4Z2P1
LinkDB
All DBs
Position
I:complement(4371926..4374172)
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AA seq
748 aa
AA seq
DB search
MSDVFVRVALDHPLPTLFDYRCDTPERVVPGMLVSVPFGKRHVVGLICEVTAHSDVPPDR
LRAIDSVCTACPPLSSEWLRLAAFAADYYQRGLGEVALPALPQALRDASRWSRLFAPQER
YSLTPTGKTALPDALPARASALRKLAQALAETEFLLAAEVRALHPKAITTLDAWQAEGWV
ALDLIEAAAELTAPVPPSAPSPTLPMLTDEQATAVEAIRDADGFAPFLLHGVTGSGKTEV
YLRALAEILAARPDAQALVLVPEINLTPQFEAAFRARFAALEGTSIVTLHSGLAEGERAR
SWFAAHTGQARIVLGTRLAVLASLPKLAIIVVDEEHDPAYKQQEGLRYSARDLAIYRAKQ
LGLPVVLGSATPSLESWWQADQGRYKRLTLSRRAVADAVLPTVRLIDLEEERRRGRASVE
GLSGPLIAALKARLDRGEQSLVFLNRRGYAPQLACDACGWVAGCPRCSAYVVLHKPERAL
RCHHCGWEARIPRSCPECGNVDIAPMGRGTQRVEETLASAVPGARVLRIDADSTRRKGSA
QALFSDVHAGEVDILVGTQMIAKGHDFQRVSLVGVLNADTALFSHDFRASERLFAQLMQV
SGRAGRAGLPGEVLVQTRYPRHALYHALARHDYVGFANSTLAERRDAHLPPFVYQALLRA
EGRTLEAALAFLQQAAASLTGIPAAERVTVYDAVPLTIVKVMHVHRAQLLIESASRGALH
ATLRAWQPLLRGMKGVLRWNLEVDPLDI
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacgtcttcgtccgcgtcgcgctggatcatccgcttccgaccttgttcgactat
cggtgcgacacacctgagcgggtggtgccgggcatgctggtcagcgtgccgtttggtaag
cgccatgtggttggacttatctgcgaagtgaccgctcacagcgacgtgccgcctgaccgc
cttcgcgctattgatagcgtgtgcactgcgtgtccgccgctatcgtcggaatggttgagg
ttggccgctttcgcagcggattactatcaacgcggcctcggcgaagtggcgttgccggct
ttgccgcaagcgctgcgcgacgcctcgcgctggtcacggctgtttgcgccgcaagagcgc
tacagtctgacgcctacaggcaaaacggccctccccgacgcactgccggctcgggcgagc
gcgttgcgcaagctggcgcaggcattggccgagaccgagtttctgctggccgccgaggtt
cgcgcgctgcaccccaaagcgatcacgacgctcgatgcatggcaggcggaaggctgggta
gcgctggacctcatcgaagctgccgccgagcttaccgctccggtgccacccagcgcgccc
tcgcccacgctgcccatgctcaccgacgagcaggcgacggctgtcgaagccattcgcgac
gccgacggttttgcgccatttctgctgcacggcgtgacgggcagcggcaagacagaggtc
tatctgcgggcactcgcggagatcctggccgccaggcccgacgctcaggcgcttgtcctc
gtgcctgaaatcaatctgacgccgcagttcgaagcggcttttcgcgcgcgcttcgccgcg
ctcgaaggcacgtcgatcgtcacgctgcacagcggtctcgcggaaggcgagcgcgcccgc
agctggttcgccgctcacacagggcaggctcgcatcgtactcggcacccggctggcggtg
ctcgcctcgctgcccaagctcgcgatcatcgtcgtcgacgaggagcacgatcccgcctac
aagcagcaggaaggcttgcgctattcggcgcgcgatctggcgatctaccgcgccaagcag
ctcggattgccggttgtgctcggctcggccacgccgtcgctggaaagctggtggcaagcc
gatcaggggcgctacaagcggctcaccctgtcgcgccgggcggtcgccgacgccgtattg
cccaccgtcagactgatcgatctggaagaagagcggcgccgcggccgggcgtcggtggag
gggttgtcggggccgttgatcgccgcgctgaaggcgcggctcgaccgcggcgagcaaagc
ctcgtgttcctgaaccgccgcggttacgcgccgcagcttgcctgcgacgcctgcggctgg
gtcgccggttgtccgcgttgcagcgcctacgtggtgctgcataagcccgagcgcgcgctc
cgctgccaccactgcgggtgggaagcacgcattccgcgctcgtgcccggagtgcggcaac
gtcgacatcgcgccgatggggcgcggcacgcaacgcgtcgaagaaacgctggcgagcgcg
gtgcccggcgcgcgggtattgcgtatcgacgccgacagcacgcgccgcaagggcagcgca
caggcgctgttttccgacgtccacgcgggcgaggtcgacatcctcgtcggcacgcagatg
atcgccaagggccacgacttccagcgcgtgtcgctggtcggcgtgctgaacgccgacacc
gcgctcttttcccacgacttccgcgccagcgaacggcttttcgcccagttgatgcaagta
agcggccgggcaggccgcgcgggcttgcccggcgaagtgctggtgcaaacgcgctatccg
cgccacgcgctctaccacgcgctggcacgccacgactatgtcggcttcgccaactccacg
ctggccgagcggcgcgatgcgcacttgccgccgttcgtctatcaggccttgttgcgggcc
gaaggccgcacgctcgaggccgcgctcgcgtttctgcagcaggcggcggccagcctgacc
ggcattcccgccgccgaacgcgtgaccgtctacgacgcagtgccgctcaccatcgtcaag
gtgatgcacgtgcaccgcgcccagttgctgatcgagagcgcatcgcgcggcgcgttgcac
gcaactttgcgtgcctggcagccgctgctgcgcggcatgaagggcgtgctgcgctggaat
ctggaagtcgatccgctcgacatctga
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