Paraburkholderia dioscoreae: PDMSB3_4358
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Entry
PDMSB3_4358 CDS
T08115
Name
(GenBank) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pdio
Paraburkholderia dioscoreae
Pathway
pdio03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PDMSB3_4358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdio03400
]
PDMSB3_4358
Enzymes [BR:
pdio01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PDMSB3_4358
DNA repair and recombination proteins [BR:
pdio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PDMSB3_4358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
BTH_I2711-like
Motif
Other DBs
NCBI-ProteinID:
VVD30802
UniProt:
A0A5Q4YWL6
LinkDB
All DBs
Position
I:complement(4447982..4448899)
Genome browser
AA seq
305 aa
AA seq
DB search
MSTPDEVATLELPFKPPFDWPRLLRFFGGRATPGVEAVEDGAYRRAIDWAGDSGTLSVRL
HPRKRCVVASIEGPVSRHADALVTPIAKMFDLHADPKKIGAELAADPWLAPLVEAVPGLR
VPGAWSGFELVVRAIVGQQVSVKAATTIIGRLVQRAGGRIEGHPHENTAWRFPTPAALAA
VDLAQIGMPGKRVAALQGFAHAVATGDVPLDSNTADADSLRAALLALPGIGPWTVEYVAM
RAWRDADAWPAWDLVLMQSICARDPSLVRPTQQRTRTDTWRPWRAYAAMHLWNEVADRAG
AARGG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgcctgacgaagtcgctaccctcgaattgccgttcaaaccacccttcgactgg
ccgcgtctgctgcgtttcttcggcggacgcgcaacgccgggcgtcgaagcggtggaagac
ggcgcgtaccgtcgcgcgatcgattgggccggcgacagcggcacactcagcgtgcgtctg
catccgcgcaagcgctgcgttgtcgccagcattgaagggcccgtgagccgccacgccgat
gcgctcgttacgccgattgcgaagatgttcgacctgcatgccgatccgaaaaagatcggc
gccgaactcgccgcagatccgtggctcgcgccgctcgtcgaagcggtgcccggcctgcgt
gtgccgggcgcgtggtcgggcttcgaactggtggtgcgcgcaatcgtcgggcagcaggtc
agcgtgaaggcggcgaccaccatcatcggcaggctcgtgcagcgcgccggcgggcgcatc
gagggacatccgcatgagaacaccgcctggcgctttccgacgccggccgcgctggccgcc
gtggatctcgcgcagatcggtatgccgggtaagcgtgtggcggcgctgcagggtttcgcg
cacgcagtcgccacaggcgacgtgccgctcgacagcaacacggccgacgcggacagcctg
cgcgccgcgttgctcgcgctgcccggcatcggcccctggaccgtcgagtacgtcgccatg
cgcgcatggcgcgacgccgacgcgtggcccgcatgggacctcgtgctgatgcagtcgatc
tgcgcgcgcgatccgtcgctcgtgcggcccacgcagcaacgtacccgcaccgacacgtgg
cggccgtggcgggcgtacgcggcgatgcatctgtggaacgaagtggcggaccgtgccggc
gccgcgcgtggcggctga
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