Pantoea dispersa: KFZ74_16115
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Entry
KFZ74_16115 CDS
T10176
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pdip Pantoea dispersa
Pathway
pdip03030
DNA replication
pdip03430
Mismatch repair
pdip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KFZ74_16115 (dnaE)
03430 Mismatch repair
KFZ74_16115 (dnaE)
03440 Homologous recombination
KFZ74_16115 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdip03032
]
KFZ74_16115 (dnaE)
03400 DNA repair and recombination proteins [BR:
pdip03400
]
KFZ74_16115 (dnaE)
Enzymes [BR:
pdip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KFZ74_16115 (dnaE)
DNA replication proteins [BR:
pdip03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KFZ74_16115 (dnaE)
DNA repair and recombination proteins [BR:
pdip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KFZ74_16115 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UKY35819
LinkDB
All DBs
Position
complement(3397447..3400929)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMVDGLAKTGPLVKKAAALGMPAIAITDYTNLCGLVRFYGSAHSA
GIKPIVGADFQVASDLMGDELTQLTVLAANNTGYQNLTLLISRAYQRGYGIAGPIIDRDW
LLELGEGLILLSGGRRGDVGRSLLRGNNALVAQSLSFYQQHFPNRYYLELTRTGRPDEEA
YLHAAVELAIAESVPVVATNEVCFLNEEDFDAHEIRVAIHDGYTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDFLVMKSREGL
EERLAFLFPDEQVRAERRPEYDERLDIELNVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFQAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDENGQFPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKQGLPPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFQDGAEKMGINGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYPFHVNDDGEIVYGIGAIKG
VGEGPIEAILEARNQGGYFKELFDLCARTDTKKINRRVMEKLIMSGAFDRLGPHRAALMS
ALGDALKAADQHAKAEATGQADMFGVLAEEPEQVEQSYAAITPWPEQVQLDGERETLGLY
LTGHPINQYLKEIERYVGGMRLKDMHPTERGKVTVAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSCGLKMIAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARAKLRFGAAWRISPSD
RLLNDLRSLVGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacctcgttttatacatctgcgcgtacacagcgattactccatggtcgatggt
ctggccaagaccgggccgctggtaaaaaaggcggccgcgctcggcatgccagccattgcc
attaccgactacaccaacctgtgcgggctggtgcgcttttatggcagcgcgcacagcgcc
ggtatcaaaccgatcgtcggggctgacttccaggtggccagcgatttgatgggcgatgag
ctgacgcagctcaccgtgctggccgctaataacaccggttaccagaatctgacgctactc
atttcgcgcgcttaccagcgcggttacggtatcgccggaccgattatcgatcgcgactgg
ctactggagctgggcgaagggttgattctgctgtcgggcggacggcgcggcgacgtcggt
cgcagcctgctgcgcggcaataacgcgctggtggcgcagagcctgagtttctatcagcag
catttccctaaccgctactatctggaactgacgcgcaccggccggccagacgaagaggcc
tatctgcacgccgcggttgagctggcgattgctgaatcggtgccggtggtggccaccaat
gaagtctgcttcctcaacgaagaagatttcgatgcccatgaaatccgcgtggcgattcac
gacggctacacgctggacgatcctaaacgtccgcgcaactacagtcctcagcaatatatg
cgcagcgaagaggagatgtgcgagctgttctcggacatcccggaagcgctggaaaacagc
gtagagattgctaagcgttgtaacgtcacggtgcgcctcggcgaatacttcctgccgcag
ttcccgaccggtgacatgtcgaccgaagattttctggtgatgaagtcgcgcgaagggctg
gaggagcgcctggcgtttctcttcccggatgagcaggtacgtgccgaacgccggccggag
tatgacgagcgtctcgacatcgagctcaacgtcattaaccagatgggcttccccggctac
ttcctgatcgtgatggagtttatccagtggtcgaaggacaacggcattccggtcgggccg
gggcgtggttccggcgctggttcgctggtggcctacgcgctgaaaattaccgatctcgat
ccgctggagtttgacctgctgttcgaacgtttccttaacccggaacgtgtctcgatgccc
gactttgacgtcgacttctgcatggaaaaacgtgaccaggtgatcgatcacgtggctgag
atgtacggccgcgatgcggtgtcgcagattatcacctttggtaccatggcggcgaaagcg
gtgattcgcgacgttggtcgggtgctggggcatccgtacggctttgttgatcgcatctcg
aaactgatcccgccggatcccggcatgacgctggaaaaagcgttccaggcggaaccgcag
ctgccggagatctacgaagctgacgaagaggtcaaagcgctgatcgacatggcgcgcaag
ctggaaggggtcacgcgtaacgccggcaagcacgccggtggcgtggtcattgcgccgacc
aaaatcaccgattttgcgccgctgtactgcgatgagaacggccagttcccggtcacccag
ttcgataaaaacgacgtggaatacgccggactggtgaagtttgacttcctcggcctgcgc
acgctgaccatcatcgactgggcgctgaagatgatcaacccgcggcgtgaaaagcagggt
ttaccgccgatcgatatcgccgccatcccgctggatgacaaaaaaagcttcgacatgctg
caacgctcggaaaccaccgcggtgttccagcttgaatcgcgcggcatgaaagatctgatt
aagcgcctgaagccggactgcttcgaagatatgatcgcactggtggcgctgttccgtccg
gggccgctgcagtcgggcatggtcgataactttattgaccgtaagcacggccgtgaagcc
atctcctacccggacattcagtggcagcatgagagcctgaagccggtgctggagccgacc
tacggcatcatcctctatcaggaacaggtgatgcagattgcccaggtgctgtccggctat
acgctgggcggcgcggatatgctgcgtcgtgccatgggtaaaaagaagccggaggagatg
gccaagcagcgttcggtgttccaggacggtgctgagaagatgggcatcaacggcgaactg
tcgatgaaaatcttcgatctggtggagaagttcgcgggctacggctttaacaagtcgcac
tctgctgcttatgcactggtctcctatcagacgctgtggctgaaagcgcactatccggcc
gagttcatggcggcggtgatgaccgccgatatggataataccgagaaggtggttggactg
gtggatgagtgctggcgcatgggactgaaagtgctgccgccagacattaactccgggctc
tatccgttccacgtcaacgatgacggggagatcgtgtacggcatcggcgctatcaaaggc
gtgggtgaggggccgatcgaagcgatcctcgaagcgcgtaatcagggcggctactttaaa
gagctgtttgatctctgcgcgcgcaccgacactaaaaagatcaaccgtcgcgtgatggaa
aaactgatcatgtccggcgcgttcgatcgtcttggcccgcaccgcgcggcgctgatgagc
gcgctgggggacgccctgaaggcggcggaccagcatgccaaagccgaagcgacggggcag
gcggatatgttcggcgtgctggccgaagagcccgagcaggttgagcaatcttacgcggcc
ataacgccgtggcctgaacaggtgcagctggatggcgagcgtgagacgctcggtctgtat
ctcaccggccatccgatcaatcagtatctgaaagaaattgagcgctacgttggcggcatg
cgcctgaaagacatgcatccaacagaacgtggtaaagtgaccgttgcggccgggctggtg
attgccgcccgcgtcatggtcaccaagcgcggcaaccgaattggtatctgtactcttgac
gaccgctctggccgtctcgaggtgatgttatttaccgatgcgttagataaataccagcag
ctgctggagaaggaccgtatcctgatcgtcagtggacaggtcagctttgatgactttagc
tgtgggcttaaaatgatcgcccgggaagtcatggacatcgacgaagcgcgggaaaaatac
gcgcgcggacttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgccagtctctggagcctcatcgctccgggaccattccggtgcatctctattatcag
agagcagatgcgcgggcgaagctgcgctttggtgcagcgtggcgtatttcgcccagcgat
cgtttactcaacgatttgcggtcgttagtagggtcggagcaggtggaactggagtttgac
taa
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