Pantoea dispersa: KFZ74_17215
Help
Entry
KFZ74_17215 CDS
T10176
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pdip Pantoea dispersa
Pathway
pdip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KFZ74_17215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdip03019
]
KFZ74_17215
03009 Ribosome biogenesis [BR:
pdip03009
]
KFZ74_17215
Enzymes [BR:
pdip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KFZ74_17215
Messenger RNA biogenesis [BR:
pdip03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KFZ74_17215
Ribosome biogenesis [BR:
pdip03009
]
Prokaryotic type
rRNA helicases
KFZ74_17215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
DbpA
DeaD_C
ResIII
CMS1
Cas3-like_C_2
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UKY36021
LinkDB
All DBs
Position
complement(3649953..3651848)
Genome browser
AA seq
631 aa
AA seq
DB search
MTDIQTTFADLGLNADILESLNGMGYVKPSPIQAECIPHLLAGRDVLGMAQTGSGKTAAF
SLPLLNNVDPSVRAPQILVLAPTRELAVQVAEAMTEFSKHMRGINVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSSLRGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITKRFMKDPQEVRIQSSITTRPDISQSYWTAYGRKSDALVRFLE
AEDFDAAIIFVRTKNATLEVAETLERNGYNSAALNGDMNQALREQTLERLKDGRLDILIA
TDVAARGLDVERISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE
RTMKLTIPEVELPNAELLSQRRLAQFAAKVQQQLESSDLDQYRALLAKMQPEEELDMETL
AAALLKMAQGERPLILPPDAPRPQRREFRDRDERGGDRPRRDSRDSREGGDRPRRERRDV
GEMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIELPKGMPGEVLQ
HFTRTRILNKPMNMQLLGDAQPHERTERRSGGRDFGGERRGNREGGNREGGAPRRFSERR
EGGREGGRFSREGGRGPRRDEGAAAPRRRDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgactgatattcaaaccacttttgctgatctgggcctgaacgccgacatcctcgaatca
ctgaacggtatgggctacgttaagccatcgccaatccaggctgagtgtattcctcacctg
ctggcgggccgtgatgtgctgggtatggcgcagaccggtagtggtaaaacagcagcgttc
tcgctgccgctgctgaacaacgttgatccttctgtccgcgcaccgcaaatcctggtgctg
gcgccgacccgcgaactggcggttcaggtggctgaagcgatgacagaattctctaaacac
atgcgcggtattaacgtcgtggccctgtacggtggccagcgttatgacgtgcagctgcgc
gcactgcgccagggtccacagatcgtggttggtaccccgggccgtctgctggatcacctg
aaacgcggtaccctggacctgtccagcctgcgtggtctggtactggacgaagccgatgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccatcatggcgcagatcccggaaggt
catcagaccgcactgttctctgcaaccatgccggaagcgattcgccgtatcactaagcgt
ttcatgaaggatccgcaggaagtgcgcatccagtccagcatcactacacgcccggacatt
tctcagtcttactggaccgcttacggccgtaagtctgacgcgctggtgcgcttcctcgaa
gcggaagacttcgatgctgccatcatcttcgtgcgcaccaaaaatgccacgctggaagtt
gcagaaacgctggagcgtaacggctacaacagcgccgcgctgaacggtgacatgaaccag
gcgctgcgtgagcagacgctggagcgtctgaaagacggtcgtctggatatcctgatcgcg
actgacgttgcggcccgtggtctggacgttgagcgtattagcctggtggttaactacgac
atcccgatggatgccgaatcgtatgtacaccgtatcggccgtaccggtcgtgcgggtcgt
gctggccgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatcgaa
cgcaccatgaagctgactattccggaagttgagctgcctaacgccgagctgctgagtcag
cgtcgtctggcgcagttcgctgccaaagttcagcagcagctggaaagcagcgatctggat
cagtaccgtgcgctgctggctaaaatgcagccagaagaagagctggatatggaaacgctg
gccgctgcactgctgaaaatggcgcagggcgaacgtccactgattctgccaccggatgca
ccacgtccacagcgtcgtgaattccgcgatcgcgatgagcgtggcggcgaccgtccacgt
cgtgacagccgtgacagccgcgaaggtggcgatcgtccacgtcgcgaacgtcgtgacgtt
ggcgaaatgcagctgtaccgcattgaagtgggccgtgacgacggtgttgaagtgcgtcat
atcgtgggcgcgattgctaacgaaggcgacatcagcagccgttacatcggtaacatcaag
ctgtttggtactcactccactatcgagctgccaaaaggcatgccgggtgaagtcctgcag
cacttcacgcgtacgcgtattctcaacaagccgatgaatatgcagctgctgggcgatgca
cagccacacgagcgcaccgagcgtcgtagcggcggtcgtgacttcggtggtgagcgtcgt
ggtaaccgcgagggtggcaaccgtgaaggtggcgcacctcgtcgtttctctgagcgtcgc
gaaggcggtcgtgaaggcggacgtttcagccgtgaaggtggccgtggcccacgtcgcgac
gaaggtgcagctgcaccacgtcgccgtgatgcataa
DBGET
integrated database retrieval system
