Pantoea dispersa: KFZ74_18485
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Entry
KFZ74_18485 CDS
T10176
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pdip Pantoea dispersa
Pathway
pdip03020
RNA polymerase
Brite
Enzymes [BR:
pdip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KFZ74_18485 (rpoC)
Transcription machinery [BR:
pdip03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KFZ74_18485 (rpoC)
DNA repair and recombination proteins [BR:
pdip03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KFZ74_18485 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UKY36257
LinkDB
All DBs
Position
complement(3937859..3942082)
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVVEGGMTNLEKRQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKNMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDKVNAKGEGMVLTGPKEAERVYRAG
QAELHARVKVRITEYSKNEQEELVAKTSLIDTTIGRAILWMIVPKGLPYSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPAKKAEIIAEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANERVSKAMMDNLQTETVINRHGEEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTFEGIMMTPVIEGGDVKEPLRERVL
GRVTAEDVLKPGTADILIPRNTLIDEHWCDVVELNSVDAIKVRSVVSCETDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGTIKL
TNAKSVTNSSGKLVIVSRNVELKMIDEFGRTKESYKVPYGAVMAKGDGEQVAAGETVANW
DPHTMPVITEVGGFIRFTDMIDGQTITRQTDDLTGLSSLVVLDSAERTAGGKDLRPALKI
VDANGNDVLIPGTDMPAQYFLPGKAIVQLEDGVKISSGDTLARVPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFE
GERVERGDVVSDGPESPHDILRLRGVHAVTRYITNEVQEVYRLQGVKINDKHIEVIVRQM
LRKATILSAGSSEFLEGEQAEVSRIKISNRDLEANGKIGATYMRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRQAGEAPV
APQVTADEASASLAELLNAGLGGSDDE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttacttaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgcgctggcctcgccagacatgatccgttcctggtctttcggtgaagttaaaaag
ccggaaaccattaactaccgtaccttcaagccggagcgtgacggtcttttctgtgcccgt
attttcggaccagtaaaagattacgaatgcctgtgcggtaagtacaagcgtctgaaacac
cgtggcgtgatctgtgagaagtgtggcgttgaagtcacgcagaccaaagtgcgtcgtgag
cgtatgggccacattgaactggcttcgccgaccgcgcacatctggttcctgaaatcactg
ccgtcccgcatcggtttgctgctggatatgccgctgcgtgacatcgaacgcgtgctgtac
ttcgaatcttatgttgtggtcgaaggcggcatgaccaatctggaaaaacgtcagattctg
accgaagagcagtaccttgacgcgctggaagagttcggtgacgaattcgacgcgaagatg
ggtgcggaagctatccaggcgctgctgaaaaatatggatctggagcaggagtgcgagcag
ctgcgtgaagagctgaacgaaaccaactctgagaccaaacgtaaaaagctgaccaagcgt
atcaagctgctggaagcgttcgtgcagtctggcaacaagccagagtggatgatcctgacc
gttctgccggtgctgccgccagatctgcgtccgctggtaccgctggacggcggtcgtttc
gctacgtcggatctgaacgatctgtatcgtcgcgtgatcaaccgtaacaaccgtctgaag
cgtctgctggatctggctgctccagatatcatcgtacgtaacgaaaaacgtatgctgcag
gaagcggtagatgccctgctggataacggccgtcgcggtcgtgccatcaccggctctaac
aaacgtcctctgaaatctttggccgacatgatcaaaggtaagcagggtcgtttccgtcag
aacctgctgggtaaacgtgttgactactccggtcgttcggttatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcactggagctgttcaaaccgttc
atctacggcaagctggaactgcgtggcctcgcgaccaccattaaagcggccaagaaaatg
gttgagcgcgaagaagcggtcgtctgggatatcctggatgaagtgattcgcgaacacccg
gtactgctgaaccgtgcaccaaccctgcaccgtctgggtatccaggcgtttgaaccggta
ctgatcgaaggtaaagcgatccagctgcacccgctggtgtgtgcggcgtataacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctggaagcg
cgtgcgctgatgatgtctaccaacaacattctgtctccagcgaacggcgagccaatcatc
gttccttcacaggacgttgttctgggtctgtactacatgacccgtgacaaagtgaacgcc
aaaggcgaaggcatggtgctgaccggcccgaaagaagctgagcgtgtttaccgcgcaggc
caggccgagctgcatgcacgcgttaaagtgcgtatcactgaatacagcaaaaatgagcag
gaagagctcgttgcgaaaaccagcctgatcgacaccaccattggtcgtgcgatcctgtgg
atgatcgtaccgaaaggtctgccttactccatcgtcaaccaggcgctgggtaagaaagcg
atctctaagatgctgaacacctgttaccgcatcctgggcctgaagccgaccgttatcttt
gctgaccagaccatgtacaccggctttgcctatgcagcccgttcaggtgcctcagtaggt
atcgacgacatggtgattcctgccaagaaagcagaaatcattgcagaagcagaagcggaa
gtggccgagattcaggagcagttccagtctggtctggttaccgcgggcgaacgttacaac
aaagtcatcgatatctgggctgcggctaacgaacgcgtatccaaagcgatgatggataac
ctgcagaccgaaaccgtgatcaaccgtcacggcgaagaagagcagcaggtttcgttcaac
agcatctacatgatggccgactccggtgcgcgtggttctgcggcacagattcgtcagctg
gcaggtatgcgtggtctgatggcgaagccagatggctccatcatcgagacgccaatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctcgacccacggtgcgcgt
aaaggtctggccgataccgcactgaaaacggcgaactccggttacctgacccgtcgtctg
gttgacgtggcgcaggacctggtagtcaccgaagacgactgtggcacattcgaaggcatc
atgatgaccccggtcatcgaaggtggcgacgttaaagagccgctgcgtgagcgtgtactg
ggtcgtgtgacggcagaagacgtgctgaagccgggcactgcggacatcctgatcccgcgt
aacaccctgatcgatgagcactggtgtgacgtggttgaactgaactccgtggacgcaatt
aaagtgcgttccgtggtgagctgtgaaaccgacttcggtgtgtgtgcacactgctacggt
cgcgatctggcacgtggtcacatcatcaacaaaggtgaggccatcggcgttatcgcagca
cagtccatcggtgagccgggtacccagctgaccatgcgtaccttccacatcggtggtgcg
gcatcgcgtgcggcagctgaatccagcattcaggtgaagaacaaaggtactatcaagctg
accaacgccaagtcagtaaccaactcctccgggaaactggttatcgtctcgcgtaacgtt
gagctgaagatgatcgacgagttcggtcgtaccaaagagagctataaagtgccttacggt
gcggtcatggcgaaaggtgatggcgagcaggttgccgcgggcgaaaccgttgcaaactgg
gatccacacaccatgccggttatcaccgaagtgggcggtttcatccgcttcactgacatg
atcgacggtcagaccattacccgtcagactgacgacctcaccggtctgtcatcgctggtg
gtactggattctgcagagcgtactgcgggtggtaaagacctgcgtccggcactgaaaatc
gttgatgccaacggcaacgacgtactgatcccgggcaccgacatgccggcacagtacttc
ctgccaggtaaagcgattgtgcaactggaagatggcgtgaagatcagctcgggtgatacc
ctggcgcgtgttccgcaggaatctggcggtaccaaggacatcaccggtggtctgccacgc
gttgccgacctgttcgaagcgcgtcgtccgaaagagccagctatcctggcggagatcagc
ggtatcatctccttcggtaaagagaccaaaggcaagcgtcgtctggtgatcaccccggtt
gacggtagcgatccgtatgaagagatgattccgaaatggcgtcagctcaacgtattcgaa
ggtgaacgtgtagaacgtggtgacgtcgtatccgacggcccggagtctccgcacgacatc
ctgcgtctgcgtggcgtccatgctgtgacccgttacatcactaacgaagtgcaggaagtt
taccgcctgcagggcgttaagattaacgataagcacatcgaagtcatcgtgcgtcagatg
ctgcgtaaagcaaccatcctgagcgcgggtagctcggagttcctggaaggcgagcaggcg
gaagtctctcgtatcaagatctccaaccgcgatctggaagcgaacggcaaaatcggcgcg
acgtacatgcgtgacctgctgggtatcaccaaagcctcgctggcaaccgaatcgttcatc
tctgcggcatcgttccaggagaccacccgtgtcctgaccgaagcagcggtagccggcaag
cgcgacgaactgcgcggcctgaaagagaacgttatcgtgggtcgtctgatcccggccggt
accggttatgcttaccaccaggatcgtatgcgtcgccgtcaggcgggtgaagcaccggtt
gcaccgcaggtgactgcggatgaagcctctgccagcctcgctgagctgctgaacgctggt
ctgggcggtagcgacgacgaataa
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