Pantoea dispersa: KFZ74_18785
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Entry
KFZ74_18785 CDS
T10176
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pdip Pantoea dispersa
Pathway
pdip00300
Lysine biosynthesis
pdip00470
D-Amino acid metabolism
pdip01100
Metabolic pathways
pdip01110
Biosynthesis of secondary metabolites
pdip01120
Microbial metabolism in diverse environments
pdip01230
Biosynthesis of amino acids
Module
pdip_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdip00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KFZ74_18785 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KFZ74_18785 (dapF)
Enzymes [BR:
pdip01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KFZ74_18785 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UKY36308
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All DBs
Position
complement(4004456..4005280)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGIGFDQLLIVEPPYDPDLDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKSDIRVSTQTGRMVLSVTSDELVRVNMGE
PNFDPQQVPLRANKAENLYLQRVAEQTVMFGAVSMGNPHCVIQVESVKTAAVETLGPALE
SHERFPERVNVGFMEVVNPEHIRLRVYERGAGETQACGSGACAAVACGIQQGILAEKVRV
DLPGGTLHIAWKGAGQPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctcgaaaatgcacggtctcggtaacgactttatggtcgtcgatgccgtgacg
caaaacgtctttttttcgccggaactgattcgccgcctggcggatcggcatctggggatc
ggcttcgatcagttgctgatcgtcgagccaccttacgatccggatctcgatttccactac
cgcatcttcaacgctgacggcagcgaagtggcgcagtgcggcaacggcgcgcgctgtttt
gcccgctttgttcgcctcaaagggctgaccaataaaagcgacattcgcgtcagcacccag
accggccgcatggtactgagcgtcaccagcgatgagctggtgcgcgtcaacatgggcgag
cccaactttgacccgcagcaggtgccgctacgcgctaacaaggcggaaaacctctatctg
cagcgcgtggccgagcagaccgtgatgtttggcgcggtatcaatgggcaatccacactgt
gtgattcaggttgaaagcgtgaaaaccgccgcggtggagacgcttggtccggcactggag
agccatgagcgctttcccgagcgcgtgaacgtcggctttatggaagtggtcaatccggaa
cacatccgtctgcgcgtgtatgaacgcggcgcgggcgaaacccaggcgtgcggcagcggc
gcctgcgccgcagtggcctgcggcattcagcagggcattctggcggagaaagtgcgcgtc
gatctgcccggcggcacgctgcatatcgcctggaaaggggccggtcagccgctgtttatg
accgggccagccacacacgtctatgatgggtttattcatctatga
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