Pantoea dispersa: KFZ74_18970
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Entry
KFZ74_18970 CDS
T10176
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
pdip Pantoea dispersa
Brite
KEGG Orthology (KO) [BR:
pdip00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
KFZ74_18970 (hmsP)
Enzymes [BR:
pdip01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
KFZ74_18970 (hmsP)
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
UKY38591
LinkDB
All DBs
Position
complement(4043418..4045430)
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AA seq
670 aa
AA seq
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MRVSRSLTIKQMATVSAVALVTICIFIVIQLFHFVQQRRVDYAQQMENVAHTVRQPLSEA
VLKADIPQAERILNTLKPAGILSRADVVLPNAFQALHADFAPEKPVPRFVARLFELPVQI
TLPLYSVERSGLPKPIAYLVLQADSSRVYQFLLSTLSTMITTYLLLALILSVAISWCINR
LIVHPLRNISRELQELPPPAILTHKLALPHNHRDDEIGMLIRSYNRNQQVLESIHDEMSR
LTTHFAVTDLPNRALFLALLDQHIRHRHSQQPWGLMVIRIETLQEANGVLSDEQRDTLML
TLVEKIRSTIDDHTLLAQTGPSDFALLMKRAHNPFRAMRLARNLMLRINQPVNLYQLQLR
PNASIGLALHDDNTVSAGEQLARATSAMMSARHQGKNQILFFDPALTERAQKRLTQEHDI
LQGLQDGQFALYLQPQINMATGELAGAEALLRMRMPDGSYGLSEEFIASAEEIGVISALG
RWVFEEACRIIAGWQRHGINLPLSVNISAVQLRDASVVSHLQGLLERHRIAPGNFVLEIT
ETAQIGDAEQAMALLRSLQQTGVAVALDDFGMGYSNLNYLHQFKALPVNKLKMDRSFVAA
LPDDDTMVRIVAAIADIIHLDVIAEGVETAEQRDWLLARGITIGQGYLYAEALPLSVFNQ
RWLASSSPSE
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcagtcgttcgttaacgataaagcagatggccaccgtgtccgccgtggcgctg
gtcaccatctgtatttttatcgtcatccagttattccattttgtgcagcagcgcagggtg
gattacgcccagcagatggagaacgtcgcgcataccgtgcgtcagccgctgtccgaagcg
gtgctcaaagccgatatcccgcaggccgaacgcattctgaatacccttaagccggcgggc
attctgtcgcgcgccgatgtggtgctgccgaacgccttccaggcgctgcacgccgacttc
gcgccggagaaaccggtgccgcgctttgtcgcccggctgttcgaactgccggtgcagatt
acgctgccgctctattcggtcgagcgcagcgggctgccgaagccgattgcctatctggtg
ctgcaggctgattcgtcgcgcgtttatcagttcctgctcagcacgctatccaccatgatc
accacctatctgctgctggcgctgattctgtccgtggcgatcagctggtgtatcaaccgg
ctgatcgtgcatccgctgcgtaatatttcgcgtgagctgcaggagctgccgccgcccgcc
attctcacccataagctggcgctgccacacaatcatcgcgacgatgagatcggcatgctg
attcgcagctacaaccgcaatcagcaggtgctggagtcgattcacgatgagatgagccgg
ctgaccacccatttcgcggtgaccgatttgcccaaccgcgcgctgtttctggcgctgctt
gatcagcacatccgccatcgccacagccagcagccgtgggggctgatggtgatccgcatc
gaaaccctgcaggaagccaatggcgtcctgagcgatgagcagcgcgatacgctgatgctg
acgctggtggaaaaaatccgcagtaccattgatgaccatacgctgctggcacagaccgga
ccgagtgactttgcgctactgatgaagcgtgcgcacaacccgtttcgcgccatgcggctg
gcgcgcaacctgatgctacgcatcaaccagccggtgaacctgtatcagctgcagctgcgc
cctaacgccagcattggcctggcgctgcacgatgacaacaccgtgtccgctggcgaacag
ctggcgcgcgccacgtcggcgatgatgtcggcgcgccatcagggtaaaaaccagattctg
ttctttgacccggcgctgaccgagcgggcgcagaagcgcttaacccaggagcacgacatc
ctgcagggcctgcaggatggccagtttgcgctttatctgcagccgcaaatcaatatggcc
accggcgagctggccggcgcagaagcgctgctgcgcatgcgaatgccggacggcagctac
gggttatccgaagagttcatcgccagcgccgaagagattggcgtcatctccgcactcggc
cgctgggtgtttgaagaggcgtgccgcattatcgctggctggcagcgccacggcatcaat
ctgccgctcagcgtgaatatctccgcagtacagctgcgcgatgccagcgtggtgagccac
ctgcaggggctgctggagcgccaccgcattgcgccgggtaacttcgtgctggagatcacc
gaaaccgcgcagattggcgatgctgaacaggcgatggcgctgctgcgctcgctgcagcaa
accggggtggcggtcgcgctggatgatttcggcatgggctactccaacctcaactacctg
catcagttcaaagcgctgccggtcaataagctaaaaatggatcgcagctttgtcgccgcg
ctgccggatgatgacaccatggtgcgcatcgtggcggcgattgccgatatcatccacctc
gacgtaattgccgaaggcgtcgaaaccgccgagcagcgcgactggctgctggcgcgcgga
attactataggacagggctacttatatgctgaagccctgcccttatcggtatttaaccag
cgctggctggccagctcgtcaccatctgaataa
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