Candidatus Pantoea soli: D8B20_00715
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Entry
D8B20_00715 CDS
T06714
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis03420
Nucleotide excision repair
pdis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D8B20_00715
03430 Mismatch repair
D8B20_00715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdis03400
]
D8B20_00715
Enzymes [BR:
pdis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D8B20_00715
DNA repair and recombination proteins [BR:
pdis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D8B20_00715
MMR (mismatch excision repair)
Other MMR factors
D8B20_00715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
PhoH
DUF6658
Motif
Other DBs
NCBI-ProteinID:
QDY40524
UniProt:
A0A518X8M2
LinkDB
All DBs
Position
159861..162023
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDGLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEQLIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQGMWYINGKKDEGLRPKHIESYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPQILHHYRERFSNILVDEFQDTNNIQYAWIRMLAGDS
GRVIIVGDDDQSIYGWRGAQVENIQRFLQDFPGAETIRLEQNYRSTNTILKAANALIANN
NGRLGKELWTDGSDGEKIALYCAFNELDEARYVVNRIKTWHENGNALQDCAILYRSNAQS
RVLEEALLQGSMPYRIYGGMRFFERQEIKDALAYLRLLANRNDDAAFERVVNTPTRGVGD
RTLDVVRQTARERQLTLWQATRELLQAKALAGRAASALQRFCELVDALASETAEMPLHVQ
TDRVIKDSGLWLMYEQEKGEKGQARIENLEELVTATRQFSYQDEDEDLMPLQAFLSHAAL
EAGEGQADKWQDAVQLMTLHSAKGLEFSQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVSRPVSHQRMG
TPVAKNDSGFTLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgcttgacggcttgaatgataaacagcgcgaggcggtcgccgca
ccgcgcagcaacctgctggtgctggccggagcaggcagtggcaaaacgcgcgtgctggtg
caccgcatcgcctggctgctgtcggtggagaactgctcgccgtactccatcatggcggtg
acgttcaccaacaaagcggcggcagaaatgcgccatcgtatcgaacagctgatcggtacc
agccagggcggcatgtggatcggtaccttccacggtctggcgcaccgtttactgcgcgcg
catcacctggatgccggtctgccgcaggatttccagattctcgacagcgaagatcagctg
cgcctgctgaagcgcctgatcaaggcgatgaatctcgatgagaagcagtggcctgcgcgt
caggggatgtggtacatcaacggcaaaaaagatgaaggtctgcggccaaaacacatcgaa
agctatggcaatccggtagagcaaacctggctgcgcatttatcaggcttatcaggaagcc
tgcgaccgggccggtctggtcgattttgccgaactgctgctgcgggcgcacgagctgtgg
ctcaataaaccgcagattcttcatcactaccgcgagcggttcagcaatatcctggtggat
gaatttcaggacaccaacaatatccagtacgcgtggattcgaatgctggccggcgacagt
ggccgggtgatcattgtgggcgatgacgatcagtccatttatggctggcgtggcgcgcag
gtcgaaaacattcagcgttttctgcaggatttccctggcgcagagacgattcgcctggag
caaaactatcgctcgaccaatacgattctgaaagcggctaacgccctgattgccaataac
aatggccgtctgggtaaagagctgtggacggacggcagcgacggcgaaaagattgcgctg
tactgcgccttcaacgagctggacgaagcgcgctatgtcgttaaccgcatcaaaacctgg
catgagaacggcaacgcgctgcaggactgcgccattctctatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgttactgcagggcagcatgccgtaccgcatctacggtggcatg
cgcttcttcgaacgccaggagatcaaagacgccctggcctatctgcgtctgctggcgaat
cgcaatgacgatgcggcttttgagcgcgtggtgaacacgccgacgcgcggcgtgggcgat
cgcacgctggacgtggtgcgccagacggcgcgcgaacgtcagctgacgctgtggcaggcg
acgcgtgagctgctgcaggccaaagcgctggccggacgggccgcctcggcgctgcagcgc
ttctgcgagctggtagatgcacttgccagtgaaacagcagagatgccgctgcacgtgcag
accgaccgcgtaatcaaagactccggcttgtggctgatgtacgagcaggagaagggcgaa
aagggccaggcgcgcatcgaaaacttagaagagctggtcaccgccacgcgccagttcagc
tatcaggatgaagatgaagacctgatgccgctgcaggcgttcttatcccatgccgcgctg
gaggccggtgaaggccaggcggacaagtggcaggatgcggtgcagctgatgacgctgcac
tcggccaaagggctggagttcagccaggtgtttatcgtcggcatggaagagggcatgttc
ccgagccagatgtcgctggatgaaggcgggcggctggaagaggagcgacgtctggcctac
gttggcgtaacgcgcgccatgcagaagctgacgctgacctacgccgagacccgccggctt
tatggtaaggaagtgtatcaccgcccatcacggtttatcggcgaactgccggaagagtgc
gtggaggaagtgcggctgcgcgccagcgtcagccgtccggtcagccatcagcgcatgggc
acgccggtggcgaaaaatgacagtggtttcacgctcggccagcgcgtgcggcatgcgaag
ttcggtgaaggcaccatcgttaacctggaaggcagcggcgaacacagccgcctgcaggtt
gcgtttcaggggcagggcatcaaatggctggtggcggcttatgcccggctggaaaccctc
tag
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