Candidatus Pantoea soli: D8B20_00870
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Entry
D8B20_00870 CDS
T06714
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis00071
Fatty acid degradation
pdis00280
Valine, leucine and isoleucine degradation
pdis00310
Lysine degradation
pdis00362
Benzoate degradation
pdis00380
Tryptophan metabolism
pdis00410
beta-Alanine metabolism
pdis00640
Propanoate metabolism
pdis00650
Butanoate metabolism
pdis00907
Pinene, camphor and geraniol degradation
pdis00930
Caprolactam degradation
pdis01100
Metabolic pathways
pdis01110
Biosynthesis of secondary metabolites
pdis01120
Microbial metabolism in diverse environments
pdis01200
Carbon metabolism
pdis01212
Fatty acid metabolism
Module
pdis_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
D8B20_00870 (fadB)
00650 Butanoate metabolism
D8B20_00870 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
D8B20_00870 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
D8B20_00870 (fadB)
00310 Lysine degradation
D8B20_00870 (fadB)
00380 Tryptophan metabolism
D8B20_00870 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
D8B20_00870 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
D8B20_00870 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
D8B20_00870 (fadB)
00930 Caprolactam degradation
D8B20_00870 (fadB)
Enzymes [BR:
pdis01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
D8B20_00870 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
D8B20_00870 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
D8B20_00870 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
D8B20_00870 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QDY40554
UniProt:
A0A518X8Q3
LinkDB
All DBs
Position
complement(192105..194288)
Genome browser
AA seq
727 aa
AA seq
DB search
MLYQGDTLSVHWLDDGIAELVFDAPGSVNKLDTKTVAALGEALGVLEQQTALRGVLLSSA
KPAFIVGADITEFLSLFDAPEAQLSQWLTYANSIFNRLEDLPVPTLAAIDGYALGGGCEC
VLATDFRVATPAARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVDGHSALK
LGLVDAVVSSENLRSAALTMLRDAITQGSWQARRAPKLAPLKLSPIEAAMSFTLAKSLVM
QTAGKHYPAPLSAVKTIEAAAGLGRDDALKLETAAFVPLAQSDVARALVGIFLNDQYVKG
LAKKYSAAAGTPQQAAVLGAGIMGGGIAYQSAWKGVPVKMKDINPQALTLGMTEASKLLN
KQMARGKIDGARLAQVLTTIQPTLDYAGFERADVVVEAVVENPQIKASVLAETEQQLRED
AILASNTSTIPISQLAQALQRPENFCGMHFFNPVPRMPLVEVVRGERTAEATLGKVVAWA
SKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFRQIDNVMEKQFGWPMGPAWLL
DVVGIDTAHHAQQVMAQGFPSRMQKAYRDAIDVLFEAKRYGQKNGLGFYRWEEDKKGKAQ
KKADAAVDALLEPVCEAKRVFSDEEILNRMMLPMLHEVVRCLEENIIASPAEADMALVYG
LGFPPFRGGAFRYMDTLGISNVVDQARRYTALGPLYALPALLTEKAHQHQRWYPAAQPID
AAALQSA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgataccctttccgttcactggctggatgatggcattgccgagctg
gtttttgacgcgccaggttcggtgaacaaactcgatacaaaaaccgtggccgctttaggc
gaggcgctgggcgtactggagcagcaaaccgcactgcgcggggtactgctctcctcagcg
aaaccggcctttattgtcggtgctgacatcacagaattcctgtcgctgtttgatgcgccg
gaagcgcagctgagccagtggctgacctacgccaacagcatttttaaccggctggaagat
ttgcctgtccccacgcttgccgcgattgatggttacgcgctgggcggcggctgcgaatgc
gtactggccacggatttccgcgtggcgacgccggcggcccgcatcggcctgccggaaacc
aaactgggtatcatgccgggcttcggtggcagcgtccgtctgccgcgcctgttgggtgcg
gacagcgcgctggagatcattgctgccggcaaagatgttgatggccacagcgcgttaaaa
ctgggcctggtggatgccgtggtcagcagtgaaaacctgcgcagcgccgcgctgaccatg
ctgcgcgatgctatcacgcaaggcagctggcaggcgcgtcgggcacctaagctggctccg
ctgaagctcagcccgattgaagccgcgatgagcttcacgctggcgaaaagcctggtgatg
cagactgccggtaaacattatccggctccccttagtgccgtgaaaaccatcgaagcagcg
gccggactggggcgcgatgatgcgctgaaactggaaacggcggcgtttgtcccgctggcg
caaagtgatgtcgcgcgcgcgctggtggggatcttcctcaacgaccagtacgtcaaaggg
ctggcgaagaaatatagcgcagccgccgggacaccgcagcaggcagccgtgctgggtgcc
ggcattatgggcggcggtattgcctaccaatcggcatggaaaggcgtgccggtaaaaatg
aaagacattaatccgcaggcgctgacgctcggcatgacggaagccagtaagctgctgaat
aaacagatggcacgcggcaaaattgacggtgcccggctggcccaggtgctgaccaccatt
cagcccacgctggactacgccggttttgagcgcgcggacgtcgtggtggaagcggtggtg
gaaaatccgcagatcaaagccagcgtgctggcggaaaccgagcagcagctgcgtgaagat
gcgattcttgcttccaacacctcaaccatccccatcagccagctggctcaggcgctgcag
cggccagaaaacttctgcggcatgcacttctttaatccggtgccgcgcatgccgctggtt
gaggtggtccgcggcgaacgcaccgcagaagcgaccctcggtaaagtggtggcgtgggcc
agtaaaatgggtaaaacgccgattgtggtcaatgactgccccggcttcttcgtcaaccgg
gtgctgttcccctattttgccgcgttcagcttgttgctgcgcgacggtgccgatttccgg
cagatcgataacgtcatggaaaaacagtttggctggccgatggggccggcatggctgctg
gacgtggtaggcattgatacggcacatcatgcgcagcaggtgatggcgcagggtttcccg
tcacgcatgcagaaagcctatcgcgatgcgattgacgtgttgtttgaagccaaacgttac
gggcagaaaaacggcctgggcttctaccggtgggaagaggacaaaaaaggcaaagcgcag
aaaaaagcggatgcggcagtggacgcgctgctggagccggtatgcgaagcaaaacgcgtc
ttcagcgacgaagagatcctgaaccgcatgatgctgccgatgctgcatgaagtggtgcgc
tgcctggaggagaacattattgcctcgccggcagaagcggatatggcgctggtatatggc
cttggcttcccgccgttccgcggtggcgccttccgctacatggatacgctgggcatcagt
aatgtggtcgatcaggccagacgttacaccgcgctcggtccgctgtacgccctgcctgcg
ctgctgactgaaaaagcgcatcagcaccagcgatggtatcccgccgcccaaccgattgac
gcagcggcgctgcaaagcgcctga
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