Candidatus Pantoea soli: D8B20_01010
Help
Entry
D8B20_01010 CDS
T06714
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis00730
Thiamine metabolism
pdis01100
Metabolic pathways
pdis01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
D8B20_01010 (thiC)
Enzymes [BR:
pdis01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
D8B20_01010 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QDY40574
UniProt:
A0A518X8R5
LinkDB
All DBs
Position
complement(224670..226589)
Genome browser
AA seq
639 aa
AA seq
DB search
MSDAKPSRREQRARAQEFIDSLQGTAFPNSTRIWITGSRPDIRVPMREIQLSPTHTGGTK
DQPHYAENEPVPVYDTAGAYGDPAAAIDVHRGLAKLRAGWIEERGDSETLRQQSSAYTQQ
RLADDGLDHLRFEHLPQPRRAIRGRRVTQLHYARQGIITPEMEFIALRENMGRERIRSEV
LLQQHPGHSFGAQLPQNITPEFVRQEVASGRAIIPANINHPESEPMIIGRNFLVKVNANI
GNSAVSSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL
EKVNGIAEDLSWAVFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMA
KWCLSHHQENFLYQHFREICEICAAYDVSLSLGDGLRPGSVQDANDEAQFAELRTLGELT
QIAWEYDVQVMIEGPGHVPMQMIRRNMTEQLEHCHEAPFYTLGPLTTDIAPGYDHFTSGI
GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM
SKARFEFRWEDQFNLALDPHTARAFHDETLPQESGKVAHFCSMCGPKFCSMKITQEVREF
AARQEAEAQPVAIGMAQMSDAFRSRGGELYHAADALKEE
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgctaaaccttctcgtcgcgagcaacgcgcccgggcgcaggaattcattgat
tcactgcagggaaccgcgttccccaattcaacgcgtatctggatcaccggcagccggccg
gatatccgggtgccgatgcgtgaaatccagctcagccctacccacactggcggtacgaaa
gatcagccgcattacgccgaaaatgaaccagtgccggtctatgacaccgccggcgcatat
ggcgatccggcggcggccattgatgtccatcgcggcctggcgaaactgcgcgccggctgg
atcgaagagcgtggcgacagcgaaacgctgcgccagcaaagttccgcctacacccagcag
cgtcttgccgatgacggccttgaccacctgcgctttgaacacctgccccaaccgcgccgc
gccattcgtggccggcgggttacccaactgcactatgcgcgccagggcatcattacgccc
gagatggagtttattgccctgcgcgagaacatgggccgtgaacgcattcgcagcgaagtg
ctgttacagcagcatccgggccacagttttggcgcgcagctgccgcaaaatatcaccccg
gagtttgtccgccaggaagtggccagcggccgcgccattattccggccaatatcaatcac
ccggaatcggaaccgatgattatcggacgaaatttcctggtgaaggttaacgccaacatt
ggcaactctgcggtcagctcctcaatcgaagaggaagtggaaaagctggtgtgggcaacg
cgctggggggcggatacggtaatggatctctctaccggccgctatatccatgaaacgcgc
gaatggattctgcgtaacagtccggtgcccattggcaccgtgcccatctatcaggcgctg
gaaaaagtgaacgggattgccgaagatctgagctgggcagttttccgcgacacgcttctg
gagcaggcagaacagggcgtcgattactttactattcacgcgggcgtactgctgcgttat
gtgccaatgaccgcgaagcgcctgaccggtatcgtttcacgcggcggctcgatcatggcg
aaatggtgcctgtcgcaccatcaggagaacttcctgtatcagcacttccgcgagatttgc
gaaatctgcgccgcttacgatgtctcgctgtcgctgggcgacggtctgcgtccgggttca
gtgcaggatgccaacgatgaagcccagttcgccgaactgcgcacgctgggcgagctgacg
caaattgcctgggaatacgatgtacaggtgatgattgaaggcccgggtcatgtgccaatg
cagatgattcgccgcaatatgaccgagcagctggaacactgccacgaagcgccattttac
acgcttggccctctgaccacggatattgcgccgggctacgatcatttcacttccggcatt
ggtgccgccatgatcggctggtttggctgcgccatgctgtgctacgtcacgccgaaagag
catctgggcctgcccaacaaagaggatgtgaagcaggggctgattacctacaagatcgct
gcccacgcggccgatcttgccaaaggccatcccggcgcgcagatccgcgataacgctatg
tcgaaagcgcgctttgaatttcgctgggaggatcagtttaatctcgcccttgatccgcat
acggcacgcgcttttcatgatgagacactgccacaggagtccggcaaagtggcgcacttc
tgctcaatgtgtggcccgaaattctgctcaatgaaaatcacccaggaggtgcgggaattt
gctgcccgccaggaagcggaggcgcagccggtggcgatcggcatggcacagatgtccgat
gccttccgcagccgcggcggcgaactctatcacgccgccgatgccctgaaagaggaataa
DBGET
integrated database retrieval system
