Candidatus Pantoea soli: D8B20_01260
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Entry
D8B20_01260 CDS
T06714
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pdis
Candidatus Pantoea soli
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdis03021
]
D8B20_01260 (rpoH)
Transcription machinery [BR:
pdis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D8B20_01260 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
KORA
UCR_14kD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QDY40615
UniProt:
A0A518X8S6
LinkDB
All DBs
Position
285507..286364
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AA seq
285 aa
AA seq
DB search
MTKEMQTLAIAPLGNLESYVRAANNWPVLTAEEEKALAEKLHYQGDLDAAKTLILSHLRF
VVHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVSSKDVLEMESRMAAQDM
TFDMSSDDDAGEGKPMAPVLYLQDKTSDFADGIEEDNWDAHAADKLSDAMLSLDERSQHI
IRARWLDDDNKTTLQELADQYGVSAERVRQLEKNAMKKLRMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagcgattgctcctctgggcaacctggaatcttatgtt
cgggctgccaacaactggccggtattaacggcagaagaggaaaaagcactggcggagaag
ctgcattaccagggcgatctggatgcagccaagacgctgatcctgtctcacctgcgcttt
gttgttcatatcgctcgtaactactccggctatggcctgccgcaggcagacctgatccag
gaaggtaacatcggcctgatgaaggcggtgcgtcgcttcaatccggaagtgggtgtgcgt
ctggtctcctttgccgtgcactggattaaagcggaaattcacgaatatgtgctgcgcaac
tggcgtatcgtgaaggtcgctaccacgaaagcacagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgtctgggctggttcaaccaggatgaagtggaaatggtggcgcgcgag
ctgggcgtcagcagcaaagacgtgctggaaatggaatcccgcatggcggcgcaggatatg
accttcgacatgtcgtctgacgacgatgccggtgaaggcaagccaatggcaccggtgctg
tatctgcaggataaaacctctgactttgccgatggcattgaagaggataactgggatgcg
cacgcggcagacaagctgagcgatgcgatgctgagcctcgacgagcgcagccagcacatc
atccgcgcccgctggctggatgatgataacaagaccacgctgcaggagctggccgatcag
tatggcgtttccgccgagcgcgtgcgccagctggaaaaaaatgccatgaagaaactgcgt
atggctatcgaagcctga
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