Candidatus Pantoea soli: D8B20_02365
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Entry
D8B20_02365 CDS
T06714
Symbol
lptF
Name
(GenBank) lipopolysaccharide ABC transporter permease LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D8B20_02365 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdis02000
]
D8B20_02365 (lptF)
Transporters [BR:
pdis02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
D8B20_02365 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Claudin_2
Motif
Other DBs
NCBI-ProteinID:
QDY40821
UniProt:
A0A518X9E6
LinkDB
All DBs
Position
518461..519651
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AA seq
396 aa
AA seq
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MTAIDEEKWLISVETSDFPAKRQVITGVLSVIIIRYLVRETLKSQLAILFILLLIFFCQK
LVRILGAAVDGEIPTNLVLTLLGLGVPEMAQLILPLSLFLAILMTLGRLYTESEITVMHA
CGLGKGVLIKAAMILMLFTSLVAAVNVIWLGPWSSRYQDEVTQNAKANPGAAALAAGQFQ
TSSDGNSVLFVEGVKGNTFGNVFLAQLRPKGNARPSVVLADSGHMTQRPDGSQVVTLDKG
TRFEGTAMLRDFRITDFVNYQAIVGYKEAVLDPNDADQAGIRTLYANKTPSFQAELHWRL
TLIFSVLVMALMVVPLSVVNPRQGRVLSMLPAMLLYLIFFLLQSSLRSNAAKGRFDPAIW
MWVVNFAYLGLAVALNVWDTVPMRRLRARFSRGGAV
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgacggccattgatgaagaaaaatggctgataagcgttgaaactagcgattttcctgca
aaaagacaagttatcacaggcgtactaagcgtgatcatcattagatatctggttcgggaa
acgctcaaaagccagctggctatcctgttcatcctgctgctgatcttcttttgtcagaag
ttagtgaggattctgggagctgcggtggatggcgaaatcccaacaaatctggttctgaca
ttgttaggacttggcgtgcctgaaatggcacaacttatcctgcccctgagcctgtttctg
gcaattttaatgacccttgggcggctgtacaccgaaagtgaaatcacggtgatgcacgcg
tgcgggttaggtaaaggcgtgctgattaaagcggcgatgattctgatgctgttcacctcg
ctggtggcagcggtgaacgtcatctggctggggccctggtcttcgcgctatcaggacgaa
gtgacgcagaacgccaaagcgaacccgggcgcagccgcgctggcggccggtcagttccag
acctccagcgacggcaactccgtactgttcgtggaaggagtgaagggcaataccttcggc
aatgtgttcctggcgcagctgcggccgaaaggcaacgcgcggccttcagtggtgctggcg
gacagcggccatatgacgcagcgcccggacggctctcaggttgtgacgctggataaaggc
acgcgctttgaaggcacggccatgctgcgcgatttccgcattacggatttcgttaactat
caggcgattgtgggctataaagaggcggtactggatcctaacgatgccgaccaggcgggc
atccgcacgctttatgccaacaaaaccccgtcgttccaggccgagctgcactggcgctta
acgctgatcttctccgtgctggtgatggcgctgatggtggtgccgcttagcgtggtgaac
ccgcgtcagggacgcgtgctctcaatgctgcccgcgatgctgctttacctgatcttcttc
ctgctgcagagctcgctgcgctccaacgcggcgaaagggcgctttgacccggccatctgg
atgtgggtggttaacttcgcctatctggggctggcagtggcgctcaacgtatgggatacc
gtgccgatgcgccgcctgcgcgcgcgcttcagccgtggaggggcggtgtga
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