Candidatus Pantoea soli: D8B20_02385
Help
Entry
D8B20_02385 CDS
T06714
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D8B20_02385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdis02000
]
D8B20_02385
Transporters [BR:
pdis02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
D8B20_02385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QDY40825
UniProt:
A0A518X9E3
LinkDB
All DBs
Position
complement(523862..525433)
Genome browser
AA seq
523 aa
AA seq
DB search
MRAVLFLFTLWSSAFALQAATPKETLVVAVPLDGIISFDPAESFETVSNSVQRNLYQTLA
EPDRTAPQRLAPLLATAWQPGAAPHSLRFTLRPDARFASGNPVTAEDVVFSLTRAVQLGK
APSFILAEFGWTPDNIAQQFSILNDHQLEMRWPAQIGQDLALRLLTAPVASIVDRKTVLQ
HSVNNDSGNGWLHTHSAGSGAFVLQQYVPQQALVLTASPQAQPQPALKHVLLKGVADAGA
RRLLVQQGDVDVAYQLGPDQIDALKGDKSLRIEAFPSSLIYYLGFNTQDGTQPALGNPAL
WQAARWLVDYHTLSAALLKDQYRVHQSFLPAGFDGALTDQPFHYDVAKAKAILAKGGIPP
GTTFSLTVINQPPYIDVAQALQASFAQADVHIQLQPVAESTLWSKMRGRDFQSIFIYWGA
DYIDPNSNASAFAYNVPGGAKTLAWRTGWNIPALSASTRAAAGESDAARRRALYRDLQQR
VQQDSPFVVMLQGAQQVAVRNNVTHVQQGIGVSLLFFDTVQKQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcagtcctctttctttttaccctgtggagcagtgcgtttgccctgcaggcggct
acccccaaagagacgctggtggtggcggtgccgcttgatggcatcatcagctttgacccg
gcagaaagttttgaaaccgtcagcaacagcgtacagcgcaacctgtatcagacgctggca
gaacccgatcgcaccgcgccgcaacggctggcgccgctgctggccacggcatggcagccc
ggcgctgcgccgcacagcctgcgttttacgctccggccggacgcacgctttgccagcggc
aatccggtgacggcagaagatgtggtgttttccctgacgcgcgcggtgcagctgggtaaa
gcgccttcgtttattctggccgaatttggctggacgccggataacatcgcgcaacagttc
agcatcctcaatgaccatcagctggagatgcgctggccggcgcagattggtcaggatctg
gcgctgcgtctgctgaccgcgccggtggcctccattgtggatcgtaaaaccgtgctgcag
cacagcgtgaacaacgacagcggcaacggctggctgcatacgcactcggccggcagcggc
gcgtttgtgctgcagcagtatgtgccgcagcaggcgctggtgctgactgccagcccgcag
gcacagccgcagccagcgctgaaacacgtgttgctgaaaggcgtggccgatgccggtgcg
cggcgtctgctggttcagcagggcgatgtggacgtggcttatcagctggggccggatcag
attgatgcgctgaaaggggataaaagcctgcgcattgaggctttcccttccagcctgatc
tactacctcggctttaacacgcaggatggcacgcagccggcgctcggtaatccggcgctg
tggcaggcggcacgctggctggtggattaccacaccctgtccgccgcgttactcaaggac
cagtaccgcgtgcaccagagcttcctgccggcagggtttgacggcgcgctgacggatcag
cccttccactatgatgtggcgaaagccaaagcgatcctggcgaaaggcggcattccgccc
ggcaccaccttttcgctgacggtgatcaaccagccgccctatattgatgtggcgcaggcg
ctgcaggccagctttgcgcaggccgatgtacacattcagctgcagccggtggcggaatcc
acgctgtggagcaaaatgcgcggccgggattttcagtcgatctttatctactggggcgcc
gattatatcgatcccaactccaatgccagcgcctttgcttacaacgtaccgggcggggca
aaaacgctggcctggcgcacaggctggaacatcccggcgctgagcgccagcacgcgcgct
gccgccggtgaaagcgatgcggcacggcgtcgcgccctgtatcgcgatctgcaacagcgc
gtgcagcaggattcgccgtttgtggtgatgctgcagggtgcgcagcaggtggcggtgcgc
aataacgtcacccatgtgcagcagggcatcggcgtaagcctgctgttttttgatacggta
cagaagcagtag
DBGET
integrated database retrieval system
