Candidatus Pantoea soli: D8B20_03520
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Entry
D8B20_03520 CDS
T06714
Name
(GenBank) polynucleotide adenylyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D8B20_03520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdis03019
]
D8B20_03520
Enzymes [BR:
pdis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
D8B20_03520
Messenger RNA biogenesis [BR:
pdis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D8B20_03520
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QDY41023
UniProt:
A0A518XA03
LinkDB
All DBs
Position
complement(778688..780133)
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AA seq
481 aa
AA seq
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MFSLSRCPIFTRVANFCRRVLKRDEEAFEEVETESLMTVIPRESHNISRKDISENALKVL
YRLNKAGYEAYLVGGGVRDLLLGKKPKDFDVTTNATPEQMRKLFRNCRLVGRRFRLAHVM
FGPEVIEVATFRGHHQEESEDDRNSSQRGQNGMLLRDNIFGSIEDDAQRRDLTINSLYYS
VADFTVRDYVGGLQDLQEGIIRLIGDPETRYREDPVRMLRVVRFAAKLEMRIAPETAEPI
PRLATLLNDIPPARLFEESLKLLQAGYGYRTYQMLREYQLFQPLFPTLARHFTEKGDSPM
ERMVAQVLKNTDTRLHNEMRVNPAFLFAAMFWYPQLESAEQIAQESGLTYYDAFALSMNE
TLDEACRALAIPKRITTLIRDIWQLQLRMSRRHGKRAWKLMEHPKFRAAYDLLALRAEVE
NNHELQRLSQWWGEFQSAVPVQQKTMLNTLGDDPAPRRKPRRPRRRPSGPRRDSSSNNSA
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
attttctcactgtcgaggtgtcccatttttacccgagtcgctaatttttgccggagagtc
ctcaagcgtgacgaggaggcatttgaagaggtggaaacggaaagtctgatgaccgtcatt
ccccgtgaaagccacaatatctcacgcaaagatatcagcgaaaacgcccttaaagtgctg
tatcgcctgaataaagctggttacgaagcgtatctggttggcggcggcgtacgcgatttg
ctgctgggtaaaaagccgaaggactttgacgtgaccaccaatgccacgccagaacagatg
cgcaaactgttccgcaactgccgtctggttggccgccgcttccgcctggcacacgtgatg
ttcggtccggaagtgattgaagttgccaccttccgcggccatcaccaggaagagagcgag
gacgatcgtaacagttcacagcgcggtcagaatggcatgctgctgcgcgacaatattttt
ggcagcatcgaagatgatgcccagcgtcgcgatctgaccatcaacagcctctattacagc
gtggcggatttcacggtgcgcgattacgtaggcggcctgcaggatctgcaggaaggcatt
attcgcctgattggcgatccggagacgcgctaccgcgaagatccggtgcgcatgctgcgc
gtggtgcgcttcgccgcgaagctggagatgcgcatcgcgccggaaaccgccgaaccgatt
ccccgcctggccacgctgctgaatgacattccgcctgctcgtctgtttgaggagtcgctc
aaactgctgcaggccggttacggttaccgcacctatcagatgctgcgtgaataccagctg
ttccagccgctgttcccgacgctggcgcgccactttactgagaaaggcgatagcccgatg
gagcggatggtggcccaggtgctgaaaaacaccgacacccgtctgcacaacgagatgcgc
gttaacccggccttcctgtttgccgccatgttctggtatccgcagctggaatccgccgag
cagatcgcgcaggagagcggcctgacctactacgatgcgtttgcgctgtcgatgaacgaa
acgctggatgaagcctgccgcgcgctggcgatcccgaagcgcatcactacgctgatccgc
gatatctggcagctgcagctgcgtatgtcacgtcgccacggtaaacgcgcgtggaagctg
atggaacacccgaaattccgggccgcttacgatctgctggcgctgcgtgccgaggtggaa
aacaatcatgagctgcagcgtctcagccagtggtggggagagtttcagtccgccgtgccg
gtgcagcagaaaaccatgctgaatacgctgggcgacgatccggcaccgcgccgtaaaccg
cgtcgtccgcgccgccgtccgagcggtccgcgccgcgacagcagcagtaataacagcgcg
tcatga
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