Candidatus Pantoea soli: D8B20_03720
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Entry
D8B20_03720 CDS
T06714
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis03030
DNA replication
pdis03430
Mismatch repair
pdis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D8B20_03720
03430 Mismatch repair
D8B20_03720
03440 Homologous recombination
D8B20_03720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdis03032
]
D8B20_03720
03400 DNA repair and recombination proteins [BR:
pdis03400
]
D8B20_03720
Enzymes [BR:
pdis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D8B20_03720
DNA replication proteins [BR:
pdis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D8B20_03720
DNA repair and recombination proteins [BR:
pdis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D8B20_03720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QDY41060
UniProt:
A0A518XA39
LinkDB
All DBs
Position
825692..829174
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMVDGLAKTGPLVKKAAALGMPALAITDYTNLCGLVRFYGSAHSA
GIKPIIGADFQVASELMGDELTQLTVLAANNTGYQNLTLLISRAYQRGYGIAGPIIDRDW
LIELGEGLILLSGGRRGDVGRSLLRGNSALVAQCLSFYQQHFPQRYYLELIRTGRPDEEA
YLHAAVELAIAEGVPVVATNEVCFLNAEDFDAHEIRVAIHDGYTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMSTEDFLVMKSREGL
EERLAFLFPDEAERAQKRPAYDERLEVELNVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFQAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDENGQFPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKQGLPPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFQEGAERMGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYPFHVNDDGEIVYGIGAIKG
VGEGPIEAILEARNQGGYFKELFDLCARTDTKKINRRVMEKLIMSGAFDRLGPHRAALMS
ALGDALKAADQHAKAEATGQADMFGVLAEEPEQVEQSYAAITPWPEQVQLDGERETLGLY
LTGHPINQYLKEIERYVGGMRLKDMHPTERGKVTVAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARAKLRFGAAWRISPCD
RLLNDLRSLVGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccccgttttatacatctgcgcgtgcatagcgactattccatggtggatggc
ctggcgaaaaccgggccgctggtgaaaaaggccgcggcgctgggcatgcccgcgctcgcc
atcaccgactacaccaacctgtgcgggctggtgcgcttttacggcagcgcgcacagcgcc
ggcattaagccaattattggcgccgatttccaggtggccagcgagctgatgggcgatgag
ctgacgcagctgaccgtgctggcggccaataacaccggctatcagaacctgacgctgctg
atttcgcgcgcctatcagcgcggttacggcatcgccgggccgatcatcgatcgtgactgg
ctgatcgagctgggtgaaggcctgattttgctgtcaggcggccggcgcggcgatgtcggc
cgcagcctgctgcgcggcaacagcgccctggtggcgcagtgcttaagcttctaccagcag
cattttccgcagcgctattaccttgagctgatacgcaccgggcgccctgacgaagaggcc
tatctgcatgcggcggttgaactggcaattgcggaaggcgtgccggtggtagcgaccaac
gaagtctgcttcctgaatgcagaagattttgacgcgcacgaaatccgcgttgccatccat
gacggctatacgctcgacgacccgaaacggccgcgcaactacagtcctcagcaatatatg
cgcagcgaagaggagatgtgcgagctgttttcggacatcccggaagcgctggaaaacagc
gtagagattgctaagcgttgtaacgtcacggtgcgccttggcgaatacttcctgccgcag
ttccccaccggcgatatgagcaccgaagacttcctggtgatgaaatcacgtgaagggctg
gaggagcgtctggcctttctgttcccggatgaagcggagcgcgcgcagaagcgaccggcc
tatgacgagcgtctggaggtcgagcttaacgtcatcaaccagatggggttcccgggctac
ttcctgatcgtgatggagtttattcagtggtcgaaggataacggtattccggtcggtccg
ggccgtggttccggtgccggttcgctggtggcctatgcgctgaaaatcaccgatcttgac
ccgctggagtttgacctgctgttcgaacgtttcctgaacccggaacgcgtctcgatgcct
gacttcgacgtcgatttctgcatggaaaaacgcgaccaggtgatcgatcacgtggccgag
atgtacgggcgtgacgcggtgtcgcaaatcatcaccttcggcaccatggcggcaaaagcg
gtcatccgcgacgtgggccgcgtgcttggccacccgtacggatttgtcgatcgcatctcc
aagctgatcccacccgatccggggatgacgctggaaaaagccttccaggctgagccacag
ctgccggagatttatgaggcggacgaagaggttaaagcgctgatcgacatggcgcgcaag
ctggaaggggtaacgcgtaacgccggcaaacacgccgggggcgtggtgatcgcgccgacc
aaaattaccgattttgcgccgctgtactgcgacgaaaatggccagttcccggtgacgcag
ttcgacaagaatgacgtggaatatgccgggctggtgaagtttgacttccttggactgcgc
acgctcaccatcatcgactgggcgctgaagatgatcaacccgcggcgcgaaaagcagggg
ctgccgccgatcgatatcgccgctatcccgcttgacgataaaaaaagcttcgacatgctg
cagcgttcggaaaccaccgcggtgttccagctggaatcgcgcggtatgaaggatctgatc
aaacgcctgaagccggactgctttgaggacatgatcgctctggtggcgctgttccggccc
ggcccgctgcagtcaggtatggtggataactttatcgaccgtaaacacgggcgggaggag
atctcctatccggatattcagtggcagcatgaaagcctgaaaccggtactggaacctacc
tacggcatcattctgtatcaggaacaggtgatgcagattgcgcaggtgctctccggctat
acgctgggtggcgcagacatgctgcgccgcgccatggggaaaaagaagccggaagagatg
gccaagcagcgttccgtgttccaggaaggcgccgaacgcatgggcatcgacggcgagctg
tcgatgaaaatcttcgacctggtggagaagttcgcgggctacggctttaacaaatcacac
tctgcggcgtatgcgctggtttcctatcagacgctgtggctgaaagcgcactatccggca
gagttcatggccgcggtgatgactgcggatatggataacaccgagaaagtggtcgggctg
gtggacgagtgctggcgcatgggcctgaaagtgctgccgccggacatcaattccgggctc
tatccgttccacgtcaatgacgacggcgagattgtctatggcatcggcgccatcaaaggc
gtgggcgaagggccgattgaggccattctcgaagcgcgtaatcagggcggctactttaaa
gagctgtttgatctctgcgcccggaccgacaccaaaaagatcaaccgtcgcgtgatggaa
aagctgatcatgtcgggggcattcgatcggctggggccgcatcgtgccgcgctaatgagc
gcgctgggtgatgcgctgaaggccgccgatcagcacgccaaagccgaagccacaggccag
gccgatatgttcggcgtgctggcggaagagccggagcaggttgagcaatcctacgcggcg
attacgccgtggccggagcaggtgcagctggacggcgagcgcgaaacgctggggctctac
ctcaccggccatcccatcaaccagtatctgaaagaaattgagcgctacgtgggcggcatg
cgcctcaaggacatgcacccgacagaacgtggtaaagtaaccgtcgctgcggggctggtg
attgccgcccgcgtgatggtcacgaagcgcggcaaccgaattggtatctgtactctggac
gatcgctctggtcgcctggaggtgatgttatttaccgatgcgttagataaataccagcag
ttgctggagaaagaccgtatcctgatcgtcagtggacaggtcagctttgatgactttagc
ggcggccttaaaatgaccgccagagaagtcatggacatcgacgaagcgcgggaaaaatac
gcgcgcggacttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgccagtcgctggagcctcatcgctccgggacaattccggtgcatctctattatcag
agagcagatgcgcgggcgaagctgcgctttggtgcagcgtggcgtatttcgccgtgcgat
cgtttacttaacgatttgcggtcgttagtagggtcggagcaggtggaactggagtttgac
taa
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