Candidatus Pantoea soli: D8B20_04105
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Entry
D8B20_04105 CDS
T06714
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
pdis
Candidatus Pantoea soli
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdis03009
]
D8B20_04105 (dbpA)
Enzymes [BR:
pdis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
D8B20_04105 (dbpA)
Ribosome biogenesis [BR:
pdis03009
]
Prokaryotic type
rRNA helicases
D8B20_04105 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
P-loop_SecA
RES
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QDY41128
UniProt:
A0A518XAA0
LinkDB
All DBs
Position
complement(906672..908051)
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AA seq
459 aa
AA seq
DB search
MTAFSTLTQLPASQLDNLREMGFDAMTPVQAASLPAILAGRDVRAQAKTGSGKTAAFGIG
LLNRIDNSQFHTQALVLCPTRELADQVSNVLRQLARFTRNIKILTLCGGQPMSAQRDSLV
HAPHIVVGTPGRILDHLKRDNLDLTRLQTLVLDEADRMLEMGFRDDMEAIIGFTPDARQT
LLFSATWPDTIASLSQRFQRDALAVATEDRAELPAIEQQFIEAAASERVALLCALLSQQQ
PASCVVFCNTKRECDDIAAALNDRQISALALHGDLEQRDRERVLIRFANGSSRVLIATDV
AARGLDIKSLALVVNFQLAWDPEVHIHRIGRTGRAGETGLAVSFVTADEMVRAHALEDYL
QQKLNWVSAATLAGKTTRALPAAMMTLCIDGGRKAKIRPGDILGALTGEAGFSGDQIGKI
DLTQTHAYVAIEAAQAKKALIKLKEGKIKGKSVRAILLK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgactgctttttctaccctgacgcaacttcccgccagccagctcgacaacctgcgcgag
atgggtttcgacgccatgacgccggtgcaggccgcttcgctgcccgctattcttgccgga
cgcgacgtgcgtgcgcaggcgaaaaccggtagcggcaaaaccgccgcctttggtatcggc
ctgctgaaccgcatcgataacagccagtttcatactcaggcgctggtgctgtgcccgacg
cgcgagctggccgaccaggtcagtaatgtgctgcgccagctggcgcgcttcacgcgcaat
atcaagattctgacgctgtgcggcggccagccaatgagcgcgcagcgggattcgctggtg
cacgcgccgcacatcgtggtgggcacgccgggccgcattctcgatcacctgaaacgcgat
aatctcgatctcacccggctgcaaacgctggtgctggatgaggcggaccggatgctggag
atgggcttccgcgacgatatggaagcgatcatcggtttcaccccggatgcgcgccagacg
ctgctgttttccgccacctggccggataccattgccagcctgagccagcgtttccagcgt
gatgcgctggcggtggcaacggaagaccgcgccgaactgcctgccattgaacagcagttt
attgaagccgcagccagcgagcgcgtggcgttgctgtgtgccctgctgagccagcagcag
cctgcttcctgcgtggtgttctgtaacaccaaacgcgaatgcgatgacattgcggccgcg
ctgaacgaccggcagattagcgcgctggcgctgcatggcgatctggaacagcgtgaccgt
gagcgggtgctgatccgcttcgccaatggcagcagccgtgtgctgattgccactgatgtt
gccgcgcgcggactggatatcaaatcgctggcgctggtggttaacttccagctggcgtgg
gatccggaggtgcatatccaccgcattggccgtaccggccgcgccggcgaaacgggctta
gccgtcagctttgtcactgccgatgagatggtgcgcgcgcatgcgctggaagattatctg
cagcagaagctgaactgggtctctgccgccacgctggccggtaaaaccacgcgggcgtta
ccggcggcaatgatgacgctgtgcattgacggtgggcgtaaagccaaaatccgtccgggt
gatattctcggcgcgctgaccggcgaagccggtttcagcggcgatcagattggtaagatc
gatctgacgcagacgcacgcttacgtggccattgaggctgcgcaggcgaagaaggccctg
attaagctgaaagaaggtaaaatcaaaggcaaaagcgtccgcgccattctgctgaagtaa
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