Candidatus Pantoea soli: D8B20_04180
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Entry
D8B20_04180 CDS
T06714
Name
(GenBank) LacI family transcriptional regulator
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
pdis
Candidatus Pantoea soli
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdis03000
]
D8B20_04180
Transcription factors [BR:
pdis03000
]
Prokaryotic type
Helix-turn-helix
LacI family
D8B20_04180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_31
TetR_N
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QDY43593
UniProt:
A0A518XHB7
LinkDB
All DBs
Position
complement(921578..922615)
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AA seq
345 aa
AA seq
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MITMLDVARKAGVSKATVSRVLAGNRYVSKTTQQKVFQAIEETGYRPNLLARSLATQKSQ
NIGLIVTHSLFNGPYFSELLYQTATLTNNYGRQLILADGKTSADDERAAIEFLLDLRCDA
IIIYPRFLDTAALEAIIEQHDVPIMVVNRQLTQHAGHCVWATHQQNTCDAVDYLIQRGHH
DIAFITGLAGSPTAAARLAGYQQALANHGLPFEPARVCAGAWTPESGQQATRQLLASGVP
FSALMASNDDMAIGAALALHAAGKRLPQEVSLLGFDDIRMAEFFLPPLTTVHVPVAEMIQ
HTLAQLVAMLEGETVAPLPPFSGRLIERASVADGPFATAGRPASG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgattaccatgctggacgtagcccgtaaggcgggcgtttcgaaagccaccgtgtcgcgc
gtactggcgggtaaccgttacgtcagtaaaaccacgcagcaaaaggtatttcaggcgatt
gaagagaccggctaccgccctaacctgctggcgcgcagccttgccacgcagaaatcgcag
aacattggcctgatcgtgacccactcactcttcaatggcccctacttcagtgagttgctg
tatcagaccgcgaccctgaccaataactacgggcgtcagctgattctggccgacggtaaa
accagcgctgacgacgagcgcgcggccattgaattcctgctggatttgcgctgcgacgcc
atcatcatttatccgcgctttctggacacggcggcgctggaagcgatcattgaacagcat
gatgttccgattatggtggttaatcgccagcttacgcagcacgccgggcactgcgtctgg
gccacccaccagcagaacacctgcgacgctgtggattatctgattcagcgcggccatcat
gacattgcctttatcaccgggctggccggttctcccaccgccgccgcgcgtctggccggc
tatcagcaggcgctggcgaaccatggcctgccgtttgagccggcgcgggtctgcgccggt
gcctggacaccggaaagcggtcagcaggctacccgtcagctgctggcgtccggcgtgccg
ttcagcgcgctgatggcgagtaatgatgatatggcgattggcgcggcgctggcgctgcat
gccgccggcaaacggctgccgcaggaggtgtcgctgctggggtttgatgacattcgcatg
gcggagtttttcctgccaccgctgaccacggtgcacgttccggtagcagagatgattcag
catacgctggcacagctggtggccatgctggaaggcgaaacggtcgccccgctgccgccg
ttcagcgggcgcctgattgagcgcgcctcggtggcagacggcccgtttgctaccgccggc
cgccccgcttccggctga
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