Pantoea dispersa: D8B20_04340
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Entry
D8B20_04340 CDS
T06714
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pdis
Pantoea dispersa
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdis03400
]
D8B20_04340
DNA repair and recombination proteins [BR:
pdis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D8B20_04340
Archaeal homologous recombinant proteins
D8B20_04340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
SMC_N
AAA_21
NTPase_1
nSTAND3
cobW
AAA_15
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDY41172
UniProt:
A0A518XAF0
LinkDB
All DBs
Position
complement(952630..956307)
Genome browser
AA seq
1225 aa
AA seq
DB search
MKILTLRFKNLNALRGEWRIDFREEPFASNGLFAITGATGAGKTTLLDAICLALYHQTPR
LGGLSQSENQLMTRDTAECLAEVEFEIKGEAWRAFWSQNRARGQVDGKLQAPRVELARVA
DNQIVADKVSDKLKAIETLSGLDFARFTRSMMLSQGQFAAFLNARPGERAELLEELTGTE
IYGRISVQIFEQWRHARSELETLRARAGSMQLLEEARRAELQAQLTALTAQEQTLSAQLA
QAQQQQQWLTQAQQLAQEQQQASEALQAAEQAWLQAESDRQRLARAEPAEKLREKLQQRE
QLQHDCAAQQQQLQQLQQHQQQADAALAQHEKQYQTARQARDAAQAAQQQLETLLTEQVI
PLDQQIQTLTQQLSEQQRLLAGQQQTLEQSQQALAQHQQASERLQQQLAQQQAFQAQEAR
TAEWGPALTRWQADLARLSEREQTLAELAHRQQQLQQQVTALQQAQAERERAARPLQQAE
AQASQQRQQAEQALAALEETASSGGLRDALARHQQQRAARQQLALLAAQWRTLQPQRAQR
QQQLTQQQQQYQQAEQALQQLRDAYKREHQALLDVRRICELERTIIQLADERARLQPEQP
CPLCGSCQHPAIERYQQLQPGENQQRLAALENRVAQLKEAGTAKGEQQKLSQQQQQTLQQ
EIADLDRQIASASAQWQALCSELALTFTLEQQDEFTAWLQQQAATETQQQQQLQQREQAA
SALQQAREAHLQQQQQLAHQQQQQQLAQQQQTSTQQQLDELQQRHSGERRAAQQLTQQLT
DALAVWQFTLPAAAQREAWLAACQTRWQQWQESERLLAALQPQLAKAESELSNLQQAVSR
EQQQRDALQQAQQTMQQQLQAQQQQRAQLFGTRSTAQARQQQQASLQQHEQALTQQLQQW
QQAQSQLHTLQGQREQLVQQQQRLAERLQTADETFRAALQASDFADEAALRAALLSAAET
TLLRQRLQTLDQQRQQQLTLSEQLTRRLNTHQQQRPAALSDEAAADLPAQLEALRVALRE
NARQQGEAQQQLDSDARLRQQQQTLLTQIADDARALAQLSQLNELIGSAKGDKFRRFAQG
LTLDHLVWLANRQLDRLHGRYLLQRRLSDELELEVVDTWQGDATRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIESLFLDEGFGTLDAQTLDAALDALDALNASGKTIGVISHVEAMK
ERIPVQIKVRKMNGLGYSKLELPGT
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgacgttacgcttcaaaaacctcaatgcgctgcgcggtgaatggcggatt
gatttccgcgaggagccgtttgccagcaacggcctgttcgcgattaccggggccaccggt
gccggcaaaaccaccctgcttgatgccatctgtctggcgctctatcaccagacgccgcgc
ctcggcggtctgtcacagagtgaaaaccagctgatgacgcgcgacaccgctgaatgcctg
gcggaggtggagtttgaaatcaagggcgaagcctggcgcgctttctggagtcagaaccgc
gcccgcggccaggtggacggcaaactgcaggccccgcgcgtcgagctggcgcgcgtggcg
gataaccagattgttgccgataaagtcagcgacaagctgaaagcaattgaaacgctgtcg
gggctggactttgcccgctttacccgctccatgatgctgtcgcaggggcagttcgccgcg
tttcttaatgcccgaccgggcgaacgggccgaactgctggaagagctgaccggcactgaa
atttacggccggatttccgtacagatattcgaacagtggcgccatgcgcgcagcgagctg
gaaacgctgcgcgcccgcgccggcagtatgcagctgctggaggaggcgcgccgcgctgaa
ctgcaggcgcagcttaccgcgctgacggcgcaggagcagacgctgagcgcacagctggcc
caggcgcagcagcagcagcagtggctgacgcaggcgcagcagctggcgcaggaacagcag
caggccagcgaggcgctgcaggcggcagaacaggcgtggttgcaggcagaaagcgaccgt
cagcggctggcacgagcggagccggcagagaagctgcgcgagaagctgcagcagcgcgaa
cagctgcagcacgattgcgctgcgcagcagcagcagttacagcagctgcagcagcaccag
cagcaggccgatgcggcgctggcgcagcatgaaaaacagtatcagacagcccggcaggcg
cgtgatgcggcgcaggcggcacagcagcagctggaaacgctgctgacggaacaggtcatt
ccgctcgatcagcagattcagacgctgacacagcagctcagtgagcagcagcgtctgctg
gctggccagcagcaaacgctggaacagagccagcaggcgctggcgcagcatcagcaggcg
agtgagcgcttacaacaacagctggcgcagcagcaggcatttcaggcgcaggaagcccgc
accgcagaatggggcccggcgctgacgcgctggcaggcggatctggcgcgtctcagcgag
cgcgagcagacgctggctgagctggcgcaccgccagcagcagctgcagcagcaggtcacg
gccctgcagcaggcgcaggccgaacgcgagcgggccgcccggcccctgcagcaggcagaa
gcgcaggccagccagcaacgccagcaggcggagcaggcgctggcggcgctggaggaaacg
gccagcagtggcgggctgcgtgacgcgctggcccggcatcagcagcagcgcgcggcgcgt
cagcagctggcgctgctggctgcgcagtggcgtactctgcagccgcagcgggcgcagcgc
cagcagcagctgacgcagcagcagcagcagtatcagcaggcggagcaggccctgcagcag
ctgcgtgacgcgtacaaacgcgagcatcaggcgctgctggatgttcgccgtatctgcgaa
ctggagcgcaccattattcagctggccgacgaacgcgccagactgcagccggaacagccc
tgcccgctgtgcggctcctgccagcatccggcgattgagcgctatcagcagctgcagccg
ggcgagaatcagcagcggctggcggcgctggaaaaccgcgtggcgcagctgaaagaggcc
ggcaccgcgaagggtgaacagcagaaactttcgcagcagcagcagcagacgctgcagcag
gagatcgccgatcttgaccggcagatcgccagcgcaagcgcgcagtggcaggcgctgtgc
agtgagctggcacttaccttcaccctggaacagcaggatgaatttaccgcctggctgcag
cagcaggcggccactgaaacgcagcagcagcagcaactgcagcagcgggaacaggcggcg
tccgcgctgcagcaggccagagaggcccatctgcagcagcagcagcaactggcgcaccag
cagcagcaacagcagctggcgcagcagcagcagaccagcacgcagcagcagctggatgag
ctgcagcagcgccactccggcgagcgccgcgccgcgcagcagctgacacagcagctgacc
gacgcgctggcggtctggcagttcaccctgccggcggcggcgcagcgtgaggcctggctg
gccgcctgccagacacgctggcagcagtggcaggaaagtgagcggttacttgccgcgctg
cagccgcagctggcgaaggcagagagcgagctgagcaacctgcagcaggcggtcagtcgt
gagcagcagcagcgggacgcgctgcagcaggcgcagcagaccatgcagcagcagttacag
gcgcagcagcagcagcgtgcacagctgtttggcacgcgcagcaccgcacaagcgcgtcag
cagcagcaggccagtctgcagcagcatgaacaggcgctgacgcagcagctgcagcagtgg
cagcaggcccagagtcagctgcacacgctgcagggtcagcgtgaacagctggtgcagcag
cagcagcggctggcagaacgcctgcagaccgccgacgagacgttccgtgcggcgctgcag
gcgagcgacttcgccgatgaagccgcactgcgggcggcgctgctcagtgccgcagagaca
acactgctgcgccagcgcctgcagacgctggatcagcagcgtcagcagcagctgacgctc
agcgaacagctgacccggcggttgaatacgcatcagcagcagcgtccggcggcgctgagt
gatgaggcggcggccgatctgccggcgcagctggaggcgttgcgcgtggcgctgcgcgag
aatgcccgtcagcagggcgaggcgcagcagcagctggacagtgatgcccggctgcgccag
cagcagcaaacgctgctgacgcagatcgccgacgacgcccgggcgttagcgcagctcagc
cagctgaatgagttaattggctctgcgaaaggcgataaattccgccgttttgcgcaggga
ttaacgctggatcacctggtatggctggcgaaccggcagcttgatcggctgcacggccgc
tatctgctgcagcgacgtctcagcgatgaactggagctggaggtggtggatacctggcag
ggtgatgccacgcgcgatacgcgtacgctgtcaggcggcgaaagtttcctcgtgagcctg
gcgctggcgctggcgctgtccgatctggtcagccacaaaacgcgcattgagtcgctgttt
ctggatgagggctttggcacgctggatgcgcagacgctggatgcggcactggatgcgctg
gatgcgctcaacgccagtggcaaaaccattggcgtgatcagtcacgtggaggcgatgaaa
gagcgcattccggtgcagatcaaagtgcgcaaaatgaatggtctgggttacagcaagctg
gagctgccgggcacctga
DBGET
integrated database retrieval system