Candidatus Pantoea soli: D8B20_04345
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Entry
D8B20_04345 CDS
T06714
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pdis
Candidatus Pantoea soli
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdis03400
]
D8B20_04345 (sbcD)
DNA repair and recombination proteins [BR:
pdis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D8B20_04345 (sbcD)
Archaeal homologous recombinant proteins
D8B20_04345 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QDY41173
UniProt:
A0A518XAE6
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Position
complement(956304..957521)
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AA seq
405 aa
AA seq
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MRIIHTADWHLGQFFYSKSRAAEHQAFLDWLLQQITQHAVDALIIAGDLFDTGTPPSYAR
EMFNRFVVALQPTGCQLIVLAGNHDSVATLNESRELLACLNTRVITSATPGGEQQVLTLS
RRDGTPGAVLCAIPYLRPRDILRSKAGQSGREKQRSLLEAIGQHYQHCYAAAQAQRDALG
EPLPIIATGHLTTVGVSKSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRIANSDH
IRYSGSPIPLSFDEAGRDKSVFLLSFSSGLDSVTPLTVPLFQPLRVLKGSMAELEAQLAQ
FRDGDTAQPVWLDIEITTQEYLSDLQRHIEQLTATLPVEVLLVRRSRELRRSSLERLENE
TLSELKVEEVFARRLAQETQLEADHVASLTRLFRSTLAALEDPSA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcattcacaccgccgactggcacctcggccagttcttttacagcaaaagccgc
gctgcggaacatcaggccttccttgactggcttctgcagcagataacgcagcacgcggtg
gatgcgctgatcattgccggcgatctgtttgataccggcacaccgcccagctatgcgcgc
gagatgtttaaccgctttgtcgtcgcgctgcagcctaccggctgtcagctgattgtgctg
gcgggcaatcatgattcggtcgccacgctgaatgagtcacgcgaactgctggcctgcctg
aacacccgcgttattaccagtgcgacgccgggcggcgagcagcaggtgcttaccctgtcg
cggcgcgacggcacgccgggtgcggtgctgtgtgccattccgtatctgcgtccgcgcgac
attctgcgcagcaaagccggccagtccggacgggaaaaacagcgctccctgctggaggcc
atcggccagcactatcagcactgctatgccgccgctcaggcgcagcgtgacgcgctgggc
gaaccgctgccgatcattgccaccggccacctcaccaccgtgggcgtcagcaaaagcgac
tcggtgcgtgatatctacatcggcacgctggatgcctttccggcacaggcgtttccgcca
gcggattacatcgcgctcggccacattcaccgtccgcagcgcattgccaacagcgaccac
atccgctacagcggctcaccgattccgctcagctttgatgaagccgggcgcgacaaaagc
gtttttctgctcagcttcagcagcgggctcgacagcgtgacgccactgacggtgccactg
tttcagccgctgcgcgtgctgaaagggtcgatggcagagcttgaagcgcagctggcgcag
ttcagagacggcgataccgctcagccggtgtggctggatattgaaatcaccactcaggag
tacctcagcgatttgcagcgccatatcgaacagctgacggcgacgctgccggttgaggtg
ctgctggtgcgccgcagccgcgaactgcgccgctccagccttgaacgactggaaaatgag
acgctgagcgaactgaaagtggaagaggtctttgcccgccgcctggcgcaggaaacgcag
ctggaggccgatcacgtcgccagccttacccggctgttccgcagtacgctggcggcgctg
gaggatccctctgcatga
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