Candidatus Pantoea soli: D8B20_06230
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Entry
D8B20_06230 CDS
T06714
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
pdis
Candidatus Pantoea soli
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdis03009
]
D8B20_06230
Ribosome biogenesis [BR:
pdis03009
]
Prokaryotic type
ribosomal protein modification factors
D8B20_06230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QDY41512
UniProt:
A0A518XBG5
LinkDB
All DBs
Position
complement(1341313..1343076)
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AA seq
587 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLQDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFWLGESIASGDFVHYPNEKWFPLPEDDSLPAG
ILDARLRAFYDPEASLSASDLIDLQSGNTERGICGLPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERHIKNRIIAESISLPEIPDAVMQRYPGVVEAIARLEAE
GFPIFAYDASLGGHYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGLISWDMFKEDADYPFVDWSFAGSTHEEFDTLM
AIFRAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLLLANNNMGASLRETLLALPAS
QWEPEAYLDLIVQLDEEGHDDFTRVRELLGLATGKDNGWFTLRIGELKAMLALAGGDLDQ
ALIWTEWTMEFNQSIFSEERANYYRCLQTLLLLAMEEEREPLQYHRAFVRMYGQSAVEAA
SAAISGEAPFYGLQPVDADLKAFPAHQALLAAYEKLQAAKRRYWSAN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacgtttattccaggtaaagatgctgcactggaagactccatcgcacgcttc
cagcagaaactgcaggatctgggtttcaatattgaagaagcgtcctggctgaacccggtc
ccgcacgtctggtctgtccatatccgcgatcgcgactgtccgctgtgctttacgaatggc
aaaggtgccagtaaaaaagcggcgctggcttctgcactgggtgaatactttgagcgtctc
tccactaactatttctttgccgatttctggctgggtgagtccatcgccagtggcgatttc
gtccactatcccaacgagaaatggttcccgctgccggaagatgacagcctgccagccggc
attctggacgcgcgcctgcgtgccttttacgatccggaagcaagcctgagcgcctctgat
ctgattgacctgcagtccggcaataccgaacgcggcatctgcggcctgccctttacacgt
cagtccgatcagcagacggtctatattccgatgaacattatcggcaacctgtatgtgtcc
aacggcatgtcagccggtaacaccgcgaacgaagcgcgcgtgcagggcctgtctgaagtg
tttgagcgccacatcaaaaaccgcatcatcgccgaatccatcagcctgccggagattcct
gatgcggtgatgcagcgctatccgggcgtggtggaagccatcgcgcggcttgaagccgaa
gggttcccgatcttcgcctatgacgcatcgctgggcggccactatccggttatctgtgtg
gtcctgttcaacccggctaacggcacctgttttgcttcctttggcgcgcacccggacttc
ggcgtggcgctggagcgcaccgtgaccgaactgctgcagggacgtagtctgaaagatctt
gacgtgttcaccccgcccaccttcgatgacgaagaagttgccgagcatgctaacctggaa
actcactttatcgattccagcggtctgatttcatgggatatgttcaaagaggacgcggac
tatccgtttgtagactggagctttgccggcagcacgcatgaagagttcgatacgctgatg
gcgattttccgcgccgaagacaaagaagtctacattgccgattatgagcatctgggcgtg
tatgcctgccggattattgtaccgggcatgtcagacatctatccggcagaagatctgctg
ctggcgaacaacaatatgggtgcctcgctgcgtgaaacgctgctggccctgccggccagc
caatgggagccggaagcgtatctggatctgatcgttcagctggatgaagaaggccatgac
gattttacccgcgtacgcgaactgctgggcctggcaaccggcaaagacaacggctggttt
acgctgcgtatcggtgagctgaaagcaatgctggcgctggcaggcggcgatctggatcag
gcgctgatctggaccgaatggacaatggaattcaaccagtccatcttcagcgaagagcgt
gctaactactaccgctgcctgcagacgctgctgttgctggctatggaagaagagcgcgag
ccgctgcagtatcatcgcgcctttgtccgtatgtatggtcagtctgcggtggaagccgct
tcagccgcaatcagtggtgaagcgccattctacggcctgcagccggtggatgcggacctg
aaagccttcccggcccatcaggcgctgctggcagcctatgaaaaactgcaggcggcaaaa
cgtcgctactggtcagcaaactaa
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