Candidatus Pantoea soli: D8B20_09295
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Entry
D8B20_09295 CDS
T06714
Name
(GenBank) oligopeptide ABC transporter substrate-binding protein OppA
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis01501
beta-Lactam resistance
pdis02010
ABC transporters
pdis02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
D8B20_09295
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D8B20_09295
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D8B20_09295
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdis02000
]
D8B20_09295
Transporters [BR:
pdis02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
D8B20_09295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF6979
Motif
Other DBs
NCBI-ProteinID:
QDY42080
UniProt:
A0A518XD42
LinkDB
All DBs
Position
complement(2002559..2004193)
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AA seq
544 aa
AA seq
DB search
MKYKVAKVAARVSLALSLSVGLSSVQGAAVPAGTPLADVQRIVINNGSEVSSLDPQKTEG
VPESNVIRNLLEGLVETDNNGQLVPGVAEKWQSEEGRVWTFTLRSTARWSNGEPVTAQDF
VYSWQRLADPHTASPYASYLQTAHVVNIDAILAGKAAPDTLGVKALDDHHLQVTLSEPVP
YFVDMLAHTSMKPVYRPAVEKWGEQWTQPQHYVGNGAYTLADWVVNEKIVVKRNPHYWDN
AHTVLEQGTFLALTSETSDINRYRSGGTDMTNSVVPPDMFKKLQQTLGNEVRISPLLCTF
YYEINNKKPPFNDARVRAALKLTLDRDVIAQKIMGQGQIPAYGLTPPFTQGVTLRDPAWA
RQSQAERNASAKALLAEAGFTAQHPLRFTLLYNTSEQNKRQAIAAASMWQKNLGAQVTLQ
NQEWKTLLETRRQAQYDVVRATWCADYNEPSTFLNMLLGGSSNNTAFYHSDAFDALMAQT
LGTSDRTARAALYQQAEAQLDQDSAIVPVYYRVSVRLVKPWVGGFTGNDPQDMLALKYYY
IKKH
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataaggtagcgaaagtggccgcgcgcgtgagtctggcgctcagcctgtcagtg
gggctgtcatccgtacagggcgccgctgttccggccggcacacccttagctgatgtgcaa
cgcatcgtgattaataatggctctgaagtctcttccttagatccgcaaaaaacagaaggc
gtgccggaatcgaacgttattcgcaacctgcttgaaggcctggtcgaaaccgataataac
ggccagctggtgccaggcgtggctgaaaaatggcagagcgaagagggccgtgtctggaca
ttcacgctgcgatccacggcgcgctggagcaacggtgagccggtgacggcgcaggatttc
gtttacagctggcagcggctggccgatccgcacaccgcctctccgtatgccagctatctg
cagaccgcgcacgtggtcaacatcgacgctatcctcgccggcaaagccgcaccggacacg
ctgggtgttaaagcgctggacgatcatcatctgcaggtcacgttatccgaaccggttccc
tattttgtcgatatgctggcacatacctccatgaagccggtttaccgtccggccgtggaa
aaatggggtgagcagtggacgcagccacagcactatgtgggcaatggcgcttacaccctg
gctgactgggtagtgaatgaaaaaattgtggtgaagcgtaacccgcactactgggacaat
gcccacaccgtgctggagcagggcacctttctggcgctcacgtcagaaaccagtgacatc
aatcgctaccgcagcggcggaacggacatgaccaacagtgtcgtgccgccggatatgttt
aaaaaactgcagcagacgctgggtaatgaggtcagaatcagcccgctcctctgcacgttc
tattatgaaatcaacaacaaaaagccgccgtttaacgacgcgcgggtgcgcgccgccctg
aagctgacgctggaccgcgatgtcattgcgcagaaaatcatgggccagggacagattccg
gcttacgggctgacgccgccgtttacgcagggcgtgacgctgcgcgatccagcctgggcc
agacaaagtcaggcggagcgcaatgcgtcagcaaaagcgctgctggcggaggccggtttc
accgcgcaacatccgctgcgttttacactgctctacaacacctctgagcaaaacaaacgc
caggcgattgccgcagcctcaatgtggcagaaaaaccttggtgcgcaggttacgctgcag
aaccaggagtggaaaacgctgctggagacgcgccgtcaggcgcaatatgacgtggtacgt
gccacctggtgcgccgattataacgaaccttcgaccttcctgaatatgctgctgggcggg
tcatccaataacaccgccttctaccacagcgacgcctttgatgcactgatggcgcagacg
ctgggtaccagcgaccggacggcgcgggcggcactgtatcagcaggcggaagcgcaactg
gatcaggattccgccattgtgccggtctattatcgcgtcagcgtgcggctggtgaagccc
tgggtaggcggcttcaccggtaacgatccgcaggatatgctggcgctgaaatactattac
ataaagaaacattga
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