Candidatus Pantoea soli: D8B20_11170
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Entry
D8B20_11170 CDS
T06714
Symbol
mdtC
Name
(GenBank) multidrug transporter subunit MdtC
KO
K07789
multidrug efflux pump
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D8B20_11170 (mdtC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdis02000
]
D8B20_11170 (mdtC)
Transporters [BR:
pdis02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
D8B20_11170 (mdtC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QDY42417
UniProt:
A0A518XDY2
LinkDB
All DBs
Position
2398315..2401389
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AA seq
1024 aa
AA seq
DB search
MKFFALFIHRPVATTLLTLAIALAGILGFRLLPVAPLPQLDFPVIMISASLPGASPETMA
SSVATPLERSLGRIAGVSEMTSTSSLGSTRIILVFDFDRDINGAARDVQAAINAAQSLLP
SGMPSRPTYRKANPSDAPIMILTLTSDIYNPGQLYDYASTQLAQKLSQIDGVGDVTVGGS
SLPAVRVDLNPQALFNQGVSLDAVRTAISNANQRRPQGAIDDVSQRWQVRTNDELQSAAV
YQPLIVHYNNGAAVRLSDVATVQDSVQDVRNAGMTNGKPAVLLVVRKSPEANIIDTVDRI
RAEMPLLHDVIPAAIDLQIAQDRSPTIRASLQEVEQSLVIAVGLVILVVFLFLRDGRATL
IPAAAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHVEAGMKP
LQAALTGVREVGFTVLSMSLSLIAVFLPLLMIGGLIGRFFSEFAITLSVAILISLFISIT
LTPMMCAYLLKSQPAHTPPPPRGFSRLLLALQNGYARSLGWVLQHARWVLLLLLGTVGLT
IWLFITIPKTFLPEQDTGRLSGFISADQSISFQAMRGKLEDFMNIIKADPAVENVTGFTG
GSRTNSGMMFVSLKPLSERHESAQQVIARLRTRLANEPGANLYLNAVQDIRVGGRESNAS
YQYSLLSDNLADLREWEPKIRQAFSALPQLTDVNSDQQDNGSEMALTYDRESMARLGIDV
SAANALLNNAFGQRQISTIYQPLNQYKVVMEVDPRYTQDISALDQMFVINSAGKAIPLSW
FARWQPANAPLAVNHQGLSAASTISFNLPEGVSLSQASEAIDRTITAIGVPSSVRGSFAG
TAQVFQDSQSNQLYLMLAAIAAVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFST
PFSLIALIGILLLIGIVKKNAIMMVDFALEAERNANLTPREAIFQACQLRFRPILMTTLA
ALFGALPLVLTRGDGAELRQPLGITIAGGLVMSQLLTLYTTPVVYLMMDKLRRRKKQPGL
LTES
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattcttcgccctgtttattcaccggccggtcgcaaccaccctgctgacgctggcg
attgcgctggcgggaatacttggcttccgcctgctgccggtggcgccgctgccgcagctc
gattttccggtgatcatgatctccgcctcgctgccgggtgcgtcgccggaaaccatggct
tcctcggtcgccacgccgctggagcgctcgctggggcgcattgccggcgtcagtgaaatg
acctccaccagttcgcttggcagcacgcgcatcattctggtgtttgattttgaccgcgat
atcaacggcgccgcgcgcgacgtccaggcggccattaacgccgcgcagagcctgttgccg
agcggcatgccgagccgcccgacctaccgcaaggccaacccgtccgatgcgccgatcatg
atccttaccctgacctcggatatttataatcccggtcagctgtatgactacgcctcgacg
cagctggcgcagaagctgtcgcagattgacggcgtcggcgatgtgacggtcggcggcagt
tcgctgccggcggtgcgtgtggacctcaatccgcaggcgctgtttaatcagggggtgtcg
ctggatgcggtgcgcaccgccatcagtaacgccaatcagcgccgcccgcagggggcaatt
gatgatgtcagccagcgctggcaggtgcgtaccaacgacgaactgcagagcgcggcggtc
tatcagccgctgattgtgcactacaacaacggcgcggcagtgcggctgagcgatgtcgcc
accgtgcaggattcggtgcaggacgtgcgtaacgccgggatgaccaacggcaagccggcg
gtgctgctggtggtgcgtaaatcgccggaagccaacatcattgatacggttgatcgtatt
cgcgcagaaatgccgctgctgcatgacgttattccggctgccatcgacctgcagattgcc
caggatcgctcccccaccattcgcgcctcgctgcaggaagttgagcagtcgctggtgatt
gccgtcgggctggtgattctggtggtgttcctgtttctgcgcgacggacgggctacgctg
atccccgccgccgcggtgccggtgtcgctgatcggcaccttcgccgccatgtatctgtgc
ggcttcagtctgaacaatttgtcgctgatggcgctgaccatcgccaccggtttcgtggta
gatgacgccattgtggtactggaaaacatcgcccgtcacgtggaagccggcatgaaaccc
ctgcaggcggcgctgaccggcgtgcgcgaagtgggctttaccgtgttgtcgatgagcctg
tcgctgattgccgtctttctgccgctgctgatgattggcggcctgattgggcgtttcttc
tcagagttcgccattacgctctccgttgccattctgatctcgctgtttatctccattacc
ctgacgccgatgatgtgtgcttacctgctgaaatcgcagcccgcgcacaccccgccgccg
ccacgcgggttcagccgcctgctgctggcgctgcaaaatggctatgcccgttcgctcggc
tgggtgctgcagcacgcccgctgggtgctgctgctgctgctcggcaccgtggggctgacc
atctggctgtttatcaccatcccgaaaacctttctgccggagcaggataccggccggctt
agcggctttatctctgccgaccagagcatttcgtttcaggcgatgcgcggcaagctggaa
gatttcatgaacatcatcaaggccgacccggcagtagagaatgtaaccggctttaccggc
ggctcgcgcaccaacagtggcatgatgtttgtgtcgctgaaaccgctgtcagagcgtcat
gagagcgcacagcaggtgattgcccggctgcgcaccaggctggcaaacgagccgggagcg
aatctctatctcaacgccgtacaggacattcgcgtcggcggtcgggaatctaacgccagc
taccagtacagcctgctgtctgataacctggccgatctgcgcgaatgggaacccaaaatc
cgccaggccttttccgccctgccgcagctgactgacgttaactccgatcagcaggataac
ggcagtgaaatggcgctgacctatgaccgggaaagcatggcgcgtctcggcattgatgtg
tctgccgccaatgcgctgctcaacaatgcctttggtcagcgccagatctccacaatttat
cagccgcttaaccagtacaaagtggtgatggaagtcgatccgcgctatacccaggatatc
agcgcgctggaccagatgttcgtcattaacagcgcgggcaaagccattccgctgagctgg
tttgcccgctggcagccggccaatgcgccgctggcagtgaaccatcaggggttatccgcc
gcctcaacgatttcgtttaacctgccggaaggggtctcgctgtcgcaggcgtctgaggca
atcgaccgcaccattaccgcgattggcgtgccatccagcgtgcgcggcagcttcgccggt
acggcgcaggtgtttcaggattcgcaatccaaccagctctacctgatgctggcggccatt
gcggcagtgtatatcgtgctgggtattctgtatgaaagctatgtgcacccgctgaccatt
ctctctaccctgccctccgccggcgtaggtgcgctgctggcgctggaactgttcagcacg
ccgttcagcctgattgcgctgattgggattctgctgctgattggcatcgtgaaaaagaac
gccatcatgatggtggattttgcactggaggccgagcgcaacgctaacctgacgccacgt
gaagcgattttccaggcctgccagctgcgcttccgcccgattctgatgaccacgctggcg
gcgctgtttggcgcactgccgctggtgctgacccgcggcgacggcgccgagctgcgtcag
ccgctgggtataacgattgccggcgggctggtgatgagtcagttgctgacgctctacacc
acgccggtggtttatctgatgatggataagctgcgccggcgtaaaaagcaaccggggtta
ctcactgagtcataa
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integrated database retrieval system
