Candidatus Pantoea soli: D8B20_12520
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Entry
D8B20_12520 CDS
T06714
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D8B20_12520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdis02000
]
D8B20_12520
Transporters [BR:
pdis02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
D8B20_12520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
Rad17
AAA
SMC_N
IstB_IS21
ORC-CDC6-like
AAA_25
AAA_30
AAA_22
AAA_28
AAA_5
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QDY42661
UniProt:
A0A518XEN9
LinkDB
All DBs
Position
complement(2681123..2682112)
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AA seq
329 aa
AA seq
DB search
MNAAAVTVSLRGCARHFSQQVALHPLDLTVHPGETLVLLGPSGCGKTTTLRIISGLERCD
AGGEVWFDDRNVTALPIEKRNVGMVFQNYALFPHLTVADNVAYGLKVQGVARAERDARVK
AMLERVDLSALAQRSIARLSGGQKQRVALARALAAQPKVLLFDEPLAALDARLRDRLRLE
IGALLKTLAITAVYVTHDQQEAMALGDRIAVMEQGRLVQLDTPQNIYRQPASKFVADFVG
AINCVAVDARGTPQRFCRPEDVLLASEGHYPHPGFILGSTFLGATQRLMIDIGLATPIQV
DRHARETWHAGQPVSWALAQDAALHFSAS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgcagccgttacggtttcgctgcgcggctgtgcgcggcatttcagtcagcag
gtggccctgcatccgctcgatttaaccgtccatcccggcgaaaccctggtgctgctgggc
ccgtccggctgcggcaaaaccaccacgctgcgcatcatcagcggactggagcgctgcgat
gccgggggagaagtgtggtttgacgatcgcaatgtgaccgcgctgccgattgagaaacgc
aacgtggggatggtgtttcagaactatgcgctgtttccgcatcttacggtggcagacaac
gtcgcctatggcctgaaagtgcagggcgtggcgcgcgccgaacgtgacgcgcgcgtgaag
gcgatgctggaacgggtggatctcagcgccctggcgcagcgcagtatcgccagactgtcc
ggtggccagaagcagcgcgtggcgctggcgcgcgcgctggccgcacagcccaaagtgctg
ctgttcgatgaacccctggccgcgctggatgcgcgcctgcgcgatcggttgcggctggag
attggcgcactgctgaagacgctggcgattaccgccgtgtatgtcacgcacgatcagcag
gaagcgatggcgctgggcgatcggatcgcggtgatggaacagggccggctggtccagctg
gatacaccgcaaaacatctaccggcagccggcctcaaaattcgtggcggattttgttggc
gcgattaactgcgtcgcggttgatgcccggggcacgccgcagcgcttttgccgcccggag
gatgtgctgctggcgagcgagggtcactatccgcacccgggctttattctgggcagcacc
ttcctcggcgccacgcagcggctgatgatcgacatcggtctcgccaccccgattcaggtg
gaccgccatgcgcgcgaaacctggcatgccgggcaaccggtcagctgggcgctggcacag
gatgccgcgctccatttttctgcttcctga
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