Candidatus Pantoea soli: D8B20_12665
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Entry
D8B20_12665 CDS
T06714
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
D8B20_12665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdis03400
]
D8B20_12665
Enzymes [BR:
pdis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
D8B20_12665
DNA repair and recombination proteins [BR:
pdis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
D8B20_12665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
TFIIA
Motif
Other DBs
NCBI-ProteinID:
QDY42690
UniProt:
A0A518XEN8
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All DBs
Position
2711881..2713251
Genome browser
AA seq
456 aa
AA seq
DB search
MSLPPTASIFTVSRLNTTVRQLLENEMGLVWLSAEISNFTQPASGHWYFTLKDDGAQVRC
AMFRNSNRRVSFRPQHGQQVLVRASITLYEPRGDYQLIIESMHPAGEGLLQQQFEQLKTR
LAAEGLFDQHYKQPLPEPARQVGVITSATGAALHDVLRVLHRRDPSLPVVIYPTVVQGVD
APAAIVRAIELANQRNECDVLIVGRGGGSLEDLWSFNDERVARAIFASRLPIVSAVGHET
DITIADFVADLRAPTPSAAAELVSRNQLELLRRLQSQQQRLEMAMDYYVAQQQRRFTRLQ
HRLQQQHPQLRLARQQTALFQLQRRLNEAMELRLRSARLQQERLVQRLNHQQPQGRILRA
QQQLQQWHYRLQQGLEKQLSHNRQRFGALAAQLEAVSPLATLARGFSVTTDTRGLVVKKT
AQLQPGDVLRTRLDDGWVESAVTALQPEKKRRRKSS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctaccgccaaccgccagtatttttaccgtcagccgtctgaacaccacggtgcgt
cagctgctggaaaatgagatgggcctggtgtggctcagcgctgagatctcgaattttacc
cagccggcctccggtcactggtactttacgctgaaagacgatggcgcacaggtacgctgt
gccatgttccgtaacagcaatcgtcgcgtcagcttccgcccgcagcatggtcagcaggtg
ctggtgcgtgccagcatcacgctgtatgagccgcgcggcgactaccagctgatcattgaa
agtatgcatccggcgggcgaaggcctgctgcagcagcagttcgaacagcttaaaacccgc
ctggcggcggaaggcctgttcgatcagcattataaacagccgctgccggaaccggcgcgc
caggtcggcgttatcacctctgccaccggggcggcgctgcatgacgtattgcgcgtgctg
caccgccgcgatccctcgctgccggtggtgatctaccccaccgtggtacagggcgtggac
gcgccggcggcaatcgtgcgcgccattgaactggccaaccagcgcaatgagtgtgatgtg
ctgatcgtcggtcgcggcggcggttcgctggaagatttatggagcttcaacgacgagcgc
gtggcgcgggccatttttgccagccgcctgccaatcgtcagcgcggtgggccatgaaacg
gacatcaccatcgccgattttgtcgctgacctgcgcgcgccgacaccgtcggcggcggcc
gagctggtcagccgtaatcagcttgaactgctgcgccgcctgcagtcacagcagcagcgc
ctggaaatggcaatggattattatgtggcgcagcagcagcgccgctttacgcgtctgcag
catcgcctgcagcagcagcatccgcagctgcggctggcccgccagcagacggcgctgttt
cagctgcagcgccgtctgaatgaggcgatggaactgcggttgcgcagcgcccgtcttcag
caggaacgtctggtccagcgtctcaaccaccagcagccgcaggggcgcattctgcgcgcg
cagcagcagctgcagcagtggcactatcgtttacagcaggggctggaaaagcagctcagc
cataaccggcagcgctttggcgcactggcggcgcagctggaagccgtcagcccgctggca
acgctggcacgcggcttcagcgtcaccaccgacacccgcggcctggtcgtgaaaaaaacc
gctcagctgcaacccggtgatgtgctgcgtacccggctggatgatggctgggttgagagc
gcagtcaccgcgctgcagccggaaaaaaagcgccgccgtaaatcgtcgtaa
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