Candidatus Pantoea soli: D8B20_12875
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Entry
D8B20_12875 CDS
T06714
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D8B20_12875 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdis03400
]
D8B20_12875 (recO)
DNA repair and recombination proteins [BR:
pdis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
D8B20_12875 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
D8B20_12875 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
QDY42730
UniProt:
A0A518XES3
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All DBs
Position
complement(2763969..2764697)
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AA seq
242 aa
AA seq
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MEGWQRAFVLHSRPYSETSLLLDLFSESEGRVRVLAKGARSRRSQLKGALQPFTPLLVRW
GGRGEVKTLRNAEAVSLALPLSGITLYCGLYVNELLSRVLEQEIPFSDLFFDYLHCIQTL
AAGQGSPEPALRRFELALLGHLGYGVDFLHCAGSGEEIEETMTYSYREEKGFIASLVVNQ
RSFTGRQLRALWSREFPDADSLRAAKRFTRMALKPYLGGKPLKSQELFRQFIPKKKPDAA
ND
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctggcaacgcgcttttgtgctgcatagtcgcccttacagcgaaaccagcctg
ctgctcgatctgttcagcgaaagcgaagggcgcgtacgcgtgctggcgaaaggcgcgcgc
tcgcgccgctcgcagctgaaaggggcgctgcaaccctttaccccgctgctggtgcgctgg
ggcggccgcggtgaggtgaagaccttgcgcaatgccgaagcggtgtcgctggcattgccg
ctcagcggtatcacgctctactgcggcctgtacgtcaatgaactgctgtcgcgcgtgctg
gagcaggaaatcccgttctccgatctcttcttcgattatctgcactgtatccagacgctg
gcggccggtcagggttcacccgaaccggcactgcgccgctttgagctggcgctgctcggc
cacctgggctacggcgtggattttctccactgcgcgggcagcggcgaagagattgaagag
acgatgacctacagttatcgcgaagaaaaagggtttatcgccagcctggtggtcaatcag
cgcagcttcaccggccggcagctgcgggcactctggtcccgggagtttccggatgccgac
agcctgcgcgccgccaaacgcttcacgcggatggcgctgaaaccctatctggggggaaaa
ccgctgaaaagccaggagttgtttcgtcagttcatcccgaaaaagaaaccggatgcggcg
aacgactga
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