Candidatus Pantoea soli: D8B20_13510
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Entry
D8B20_13510 CDS
T06714
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pdis
Candidatus Pantoea soli
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdis03021
]
D8B20_13510 (rpoS)
Transcription machinery [BR:
pdis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D8B20_13510 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QDY42830
UniProt:
A0A437T600
LinkDB
All DBs
Position
complement(2890365..2891357)
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AA seq
330 aa
AA seq
DB search
MSQNTLKVNELHDDAEFEENGAEVFDEKALVENEPGDNEVAEEELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVFFARRALRGDIPSRRRMIESNLRLVVKIARRYSNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQTQGLNIEALFRE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaatacgctgaaagttaatgagttacacgatgatgcggaattcgaggagaac
ggagctgaggtttttgatgagaaggctctcgttgagaacgaacctggtgataacgaagta
gcggaagaagagttgttgtcacagggtgcgacgcaacgcgtgctggatgcgacgcagctt
tacctcggcgagattggttactctcctctgttaacggcggaagaagaagtcttttttgcc
cgtcgtgcactgcgaggtgacatcccttctcgtcgccgcatgattgaaagtaacttacgc
ctggtggtgaaaattgcccgtcgctacagcaatcgtggtctggccctgctggacctgatt
gaagagggtaatctcggcctgatccgtgccgtagagaagtttgacccggaacgcgggttc
cgcttctcaacttacgccacctggtggattcgtcagactattgaacgggcaattatgaac
caaacccgtacaattcgcctgccgattcatattgttaaagagttaaatgtttacctgcgt
accgcgcgtgaactgtcgcataagcttgatcatgagccgagtgcggaagagatcgctgag
cagctggacaagccagttgatgacgtgagccgtatgctgcgtctcaacgagcgtattacc
tcggttgatacaccactgggtggtgattccgagaaagcgctgctggatatcctggccgat
gagaaagacaacggtccggaagacaccactcaggacgatgatatgaagcaaagtatcgtc
aagtggctgtttgaactgaatgccaagcagcgtgaagtgctggcacgtcgtttcggcctg
ctgggctatgaagcggcaacgctggaagatgttggtcgtgaaatcgggttaacccgtgag
cgcgtccgccagattcaggttgaaggtctgcgtcgtctgcgtgaaattctgcagacgcag
ggtctgaatatcgaagcactgtttcgcgaataa
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