Candidatus Pantoea soli: D8B20_13530
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Entry
D8B20_13530 CDS
T06714
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pdis
Candidatus Pantoea soli
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdis03016
]
D8B20_13530 (truD)
Enzymes [BR:
pdis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
D8B20_13530 (truD)
Transfer RNA biogenesis [BR:
pdis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D8B20_13530 (truD)
Prokaryotic type
D8B20_13530 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
QDY42833
UniProt:
A0A518XF35
LinkDB
All DBs
Position
complement(2894323..2895366)
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AA seq
347 aa
AA seq
DB search
MSALHYLHGAPRASGIIKARPEDFVVIEDLGYPYDGEGEQLLVRIRKIGCNTRFVAEAIA
KFLGVPQRDLSYAGMKDRHAVTEQTLCFRVPGTAMPNLAGFRLEGVEILQVIRHKRKLRT
GALAGNAFRLVVREVSDRADVEQRLQRLQQQGVPNYFGEQRFGRGGNNLTQANLWAQEQF
RPRDRSMKGLLLSAARSHLFNQIVSARLQRDGALNRVQAGDALQLTGRGSWFVAQAEELP
VLQQRVDQHELRITAPLPGRGEPGVQGDALAFEQQQLASSTVLLGLLTRERVDAARRAAL
VVPDALHWRWTDAATLEMQFWLPAGSFATSVVRELLSNGASAPLGDE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcactgcattacctgcacggtgcaccgcgcgccagcggtattatcaaagcccgg
ccggaagatttcgtggtcattgaagatctgggttatccctatgatggcgaaggggaacag
ctgctggtgcgcatccgcaagatcggctgtaacacccgttttgtggctgaagctatcgcg
aaatttctcggcgttccgcaacgcgatctcagctatgccgggatgaaagaccgtcatgct
gtcaccgagcaaacgctctgtttccgcgtgccgggaacggcgatgccgaatctggcaggc
ttccgactggagggcgttgagattctgcaggtcattcgccataagcgcaaactgcgtacc
ggtgcgctggcgggaaatgcgtttcgtctggtggtgcgcgaggtgtccgatcgcgctgac
gtggagcagcggctgcaacgcctgcagcagcagggtgtccccaactactttggcgagcag
cgttttggccgcggcggcaataacctgacgcaggcgaatttatgggcgcaggagcagttt
cgcccgcgcgatcgcagcatgaaaggcctgctgctgtccgctgcgcgcagtcacctgttt
aaccagatagtcagcgcccgtttgcagcgtgacggtgcactgaatcgcgtgcaggcgggc
gatgccctgcagcttaccgggcgcggcagctggtttgtcgctcaggctgaagagctgcct
gtgctgcagcagcgggttgatcagcatgaactgcggattaccgcaccgctgcccggccgg
ggtgagccgggtgttcagggcgacgcgctggcgtttgaacagcagcagctggcgtcatcc
accgttctgctggggctgctgacgcgcgaacgcgtggatgcggcgcgccgggcggctctc
gtggtgcctgacgcgttgcattggcgctggacggacgcggccacgctggagatgcagttc
tggttacccgccggcagctttgccaccagcgtggtgcgtgaactgctgagcaacggggcc
agcgcgccgctcggcgacgagtaa
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