Candidatus Pantoea soli: D8B20_13920
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Entry
D8B20_13920 CDS
T06714
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis00300
Lysine biosynthesis
pdis00470
D-Amino acid metabolism
pdis01100
Metabolic pathways
pdis01110
Biosynthesis of secondary metabolites
pdis01120
Microbial metabolism in diverse environments
pdis01230
Biosynthesis of amino acids
Module
pdis_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D8B20_13920
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D8B20_13920
Enzymes [BR:
pdis01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
D8B20_13920
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Ortholog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QDY42905
UniProt:
A0A518XFD8
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All DBs
Position
complement(2987713..2988966)
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AA seq
417 aa
AA seq
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MPRPLTTTETALNAASLLPLAQRYSTPFWAYDAAVIRERIAQLSAFDVVRFAQKACSNIH
ILRLMRAAGVRVDAVSLGEIERALAAGYLPGGDEIVFTADVFDAPTLSRVAALHVPVNAG
SVDMLHQLGAVSPGHKVWLRINPGFGHGHSQKTNTGGENSKHGIWHSDLPLALAAIQQHG
LQLVGLHMHIGSGVDYGHLQQVCDAMVAQVIAFGQDLQAISAGGGLSIPYRVGEEAIDTR
HYFGLWNQARERIAAHLGHPVTLEIEPGRFLVAEAGVLVSQVRAVKQMGSRHFVLVDAGF
SDLMRPAMYGSYHHISLLPADGRAPGEATIESVVAGPLCESGDVFTQLEGGKVETRALPA
AQPGDYLVFHDTGAYGASMSSNYNSRPLIPEVLFENGQAREIRRAQTIQELLALELN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtcccctgacgaccactgaaaccgcgctgaatgccgccagcctgctgccgctg
gcgcagcgttactccacgcctttctgggcctacgatgcggcagttatccgtgagcggatt
gcccagctcagcgcgtttgatgtggtgcgctttgcgcagaaagcctgctcgaacatccat
attctgcgcctgatgcgcgccgcgggcgtccgggttgatgccgtgtcgctgggcgaaatt
gagcgggcgctggccgccggttacctgccgggcggcgacgagattgttttcaccgctgac
gtgtttgatgcgccgacgctttcgcgtgtcgccgcgctgcacgtgccggtgaatgccggt
tcagtggatatgctgcatcagctcggcgcggtctcgcctggtcacaaagtgtggctgcgc
atcaaccccggttttgggcatggtcacagccagaaaaccaacaccggcggggaaaacagc
aaacacggcatctggcacagcgatctgccgctggcgctggccgcgattcagcagcacggg
ctgcagctggttggcctgcatatgcacattggttccggcgtggattacggccacctgcag
caggtgtgtgacgcgatggtggcgcaggtgatcgccttcggccaggatctgcaggcgatt
tctgccggcggcgggttatcgattccttaccgcgtcggtgaagaggcgatcgacacccgg
cactatttcggtttgtggaatcaggcgcgtgaacgcatcgctgcgcatctgggccacccg
gtgacgctggaaattgaaccggggcgtttcctcgtcgcggaagcgggcgtgctggtgtcg
caggtgcgggcggttaaacagatgggcagccgccactttgtgctggtggatgccggcttc
agcgatctgatgcgtccggccatgtacggcagttatcaccatatctccctgctgccggcg
gatggccgcgcgcctggcgaggccacgatcgagagcgtggtggcaggcccgctgtgcgaa
tccggggatgtgtttacccagctggagggcggcaaagtggaaacgcgcgcgctgccggcg
gcgcagccaggtgactatctggtgttccatgataccggggcttacggcgcctctatgtca
tccaactacaacagccggccgctgattccggaagtgctgtttgaaaacggtcaggcgcgc
gagatccgccgcgcgcaaaccattcaggagctgctggcgctggagctgaactga
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