Candidatus Pantoea soli: D8B20_14685
Help
Entry
D8B20_14685 CDS
T06714
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D8B20_14685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
Big_3_5
Big_3_2
SdrD_B
Big_9
Cadherin_5
DUF4625
Big_7
GARP
Motif
Other DBs
NCBI-ProteinID:
QDY43046
UniProt:
A0A518XG32
LinkDB
All DBs
Position
complement(3178224..3181367)
Genome browser
AA seq
1047 aa
AA seq
DB search
MANEIGDVIVLNSGNSSAAIKGTDAKNPNSLVRIYLDGVAYSVVTDATGAWSFTPAGGWD
EGRHVVSIEIVDRAGNVGTPKFEIVNIDLTDPAKPEIFRVIAGNDYLTPGEATGEKMPEI
SGVADPNGIVYLYGGANGDTLIGSTKANAMGAWTITPNLTDGKHTLNVKVKDAANRESES
SDSFVVDIANGVVTHAVKHVTETAEIAETATQAAEIQAGEIGTSSLLQPRPVYKDSIAIN
AQTTAGNLVQVLFNNAVYTIIADAEGKWSYKAEDLSEGTYIAQFRYQDRAGNWGPVQQLL
FEVMPQEPEAPQIMRVVDDEGGLDYLTPYNYTNDKTPTLSGVAMPGSTVHIFDNNIEVGT
VVAGPDGRWTMTVSLNENLITHNLTANYVDVHGKTSKTSEIFNLSLDLTTPTKPEISEVL
DDEGRVTGPLNSGDTTDDTTPTFKGIADAGTLVRIWNGTELLGSAVADSRGKWEIELQLT
DGETYNLVVDSVAKGGNVSEQTDPFTLKIDASVLPPAEIGGVYNNNDSQLVEITNGAQTN
DKTPLLKGTGNDGDIVRLFVDDKLVGTVIVVDGKWEIETDELSEDTHELKVEIETPDGKV
SPPSDPYIVVVDVTAPDKPEKPEKIIDDEGDVQGEIAEGKPTDDKTPTIGGSGAEPGDTV
ELVIIDENGNAGPAIGTAIVDENGNWTVTPGQELDNGEYDLGVVITDPAGNKSEPSDPIK
VIIDDTKPADLTNFDLYDDVGPEQGIITAGGITDDKNPTLKGTAAPGTSVEIILNGNVIG
TATTGSDGKWNYEFTNLSDASYTFALRPISEAGVKGDMTAPISFIVDTTPPTAGTFDGVF
ENNKGSEQLVPVVGGERLTNDGDLILKGTGVAGDIVIIYSDAAKTQEIGRTTVDAQGNWR
FETSELVQDGEDKTIHLSVAIRDAAGNQLDIPTSYDIHIDREAPEIPDVGISSFGEVEDL
QDLAFSDVMALNSEGLFIDNGKTQLVITGNEGDEVKLEDILPEGEDIANWSQANGTVTVA
GVEYNVYQNTAGDAEVLVQNNLQVEQH
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgaaatcggtgacgtaatagttctgaattctggaaatagcagtgctgctatc
aagggtacagatgcaaaaaacccgaatagtctggtccgcatttatttagatggcgtagcg
tactctgtggtgacagatgcaacaggcgcctggtctttcacaccggcgggtggctgggat
gagggccgtcatgttgtctcaattgaaattgttgaccgtgctggtaacgtaggcacaccg
aagttcgaaatcgttaatatcgatctcactgacccggctaaaccggaaattttccgcgtt
attgctggtaatgattacctgacgccgggagaggctacaggtgaaaaaatgccggaaatt
tctggcgtagcggatccgaacggtatcgtatacctgtacggtggcgcgaatggtgacacg
ctgattggctcgaccaaagccaacgcaatgggcgcatggaccatcacccccaaccttaca
gacggcaagcatacgctgaatgttaaagtaaaagacgccgctaaccgcgaaagtgaaagc
tcagacagcttcgtggtggatatcgccaacggggtagtaacgcacgcagtaaaacacgtg
acagaaaccgcagaaatcgcagaaaccgccacgcaggcagcagaaatacaggctggcgag
atcggtaccagctcactcctccagccaaggcctgtctataaagacagcatcgccattaac
gcgcagacaaccgcaggcaacctggttcaggtgctgtttaacaatgcggtctacaccatc
atcgctgacgcagaagggaagtggtcttataaagccgaagatctgagcgaaggcacctat
attgcgcagttccgttatcaggatcgtgcaggtaactggggccctgttcaacagctgctg
tttgaagtgatgccgcaggaaccggaagcgccacaaatcatgcgtgtagtggacgatgaa
ggcgggctggattatctcacgccttacaactacaccaatgataaaacgccaaccctgtca
ggcgtcgcgatgccgggcagcaccgtgcacattttcgataataatatcgaggttggcacc
gttgtggccggtccggatgggcgctggaccatgacggtttcgttgaatgaaaacctcatt
actcacaacctgacggcaaattacgttgatgtacacgggaaaaccagtaagacgtcagaa
atcttcaacctgtcgctggatctgactaccccaacgaaaccggaaatcagcgaagtgctg
gatgacgaaggccgcgttaccggtccgctgaactctggcgataccaccgatgacaccacg
cctactttcaaaggcatcgcggatgccggtaccctggtgcgcatctggaatggcactgag
ctgctgggtagcgcagtcgcggattcgcgcggtaagtgggagatcgaactccagctgacg
gatggcgaaacctacaacctggtggtcgattccgtggcaaaaggcggcaatgtttcagaa
cagaccgatccctttacgttgaaaattgacgccagcgtcctgccgccagcggaaattggt
ggagtttataacaacaatgattcccagctggtcgagatcaccaatggcgctcagaccaat
gataaaacgccgctgctgaaaggcaccgggaatgatggcgatatcgtacgtctttttgtg
gacgacaagcttgttggaactgtcattgtcgtagatggcaaatgggaaattgaaacggat
gagctgtcagaagatactcacgagctgaaagtggagattgagacgccggacggcaaagtt
tctccgccttctgatccgtatatcgtcgtggtagatgttacagcgccggataaaccggaa
aagccagaaaaaatcattgatgacgaaggcgatgtgcagggtgaaattgccgaaggcaaa
cccaccgatgacaaaaccccgaccatcggtggttccggtgccgagccgggtgataccgtt
gagctggtcatcattgatgaaaacggcaatgcgggcccggctattggtaccgcaatcgtt
gacgagaatggcaactggactgtcacgccaggccaggagctggataacggcgaatatgac
ctgggcgtcgtgattaccgatccggcgggcaacaagtctgaaccgtctgatccgatcaaa
gtcatcattgatgataccaaaccggccgatctgacaaactttgatctgtatgacgacgtg
ggacctgaacaggggattatcactgcgggcggcatcacagacgataaaaacccaacgctg
aagggcaccgccgctccgggaacgtcggtggagattatcctcaacggtaacgtgataggt
acagccaccacaggcagcgatggcaaatggaactatgagtttactaacctgagcgatgcc
agctacacattcgcgttacgcccgatcagcgaagcgggtgtgaaaggcgatatgacggca
ccgatttcgtttattgtcgataccacaccgccgaccgccggtacctttgatggtgttttt
gagaacaataaagggagcgaacagcttgtaccagtagtcggaggtgagcgactgaccaac
gacggtgacctgatcctgaaaggaaccggcgttgcaggcgatatcgtcatcatctacagc
gacgctgcgaaaacgcaggaaattggccgcaccactgtcgacgcccagggtaactggcgc
tttgaaacgtctgagctggtgcaggacggtgaggataaaaccatccacctgagcgttgcg
attcgtgatgctgccggtaaccagctggatattccaaccagctacgatattcatatcgac
cgtgaagcaccagagatcccggacgttggtatcagctctttcggcgaagtggaagatctg
caggatctggcgttcagcgatgtgatggcgctgaacagcgaaggcctgtttatcgacaac
ggcaaaactcagctggtaatcaccggcaacgaaggtgacgaagtgaaactggaagatatt
ctgccggaaggtgaggatatcgctaactggagccaggcaaacggcacggtgaccgtggcg
ggcgtagagtataacgtctaccagaacaccgcaggtgacgcagaagtgctggtacagaac
aacctgcaggttgagcagcactga
DBGET
integrated database retrieval system
