Candidatus Pantoea soli: D8B20_15475
Help
Entry
D8B20_15475 CDS
T06714
Symbol
aaeR
Name
(GenBank) HTH-type transcriptional activator AaeR
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
pdis
Candidatus Pantoea soli
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdis03000
]
D8B20_15475 (aaeR)
Transcription factors [BR:
pdis03000
]
Prokaryotic type
Helix-turn-helix
LysR family
D8B20_15475 (aaeR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_Tnp_ISL3
HTH_28
Vp24_capsid
Motif
Other DBs
NCBI-ProteinID:
QDY43188
UniProt:
A0A518XG55
LinkDB
All DBs
Position
3345321..3346238
Genome browser
AA seq
305 aa
AA seq
DB search
MERLKGMSIFAKVVELGSFTAAARQLQLSVSSVSQIVARLEDELQVKLLNRSTRSLGLTE
AGKIYYQGCRRMLAEASQVHEQLYAFNNTPVGILRIGCSTTMAQNVLSAMTSEMLREYPG
LSVNLMTGIPAPDLIANGLDVVIRVGELQDSSLFSRRLGAMPMVVCAAKSYLAQHGTPVK
PGEIDNFSWLEYSVRPDNTFELVAPEGLVTRLTPQGRFVTNDSQTLIRWLKAGCGIAYVP
LMWVIDEITAGEIDILFPQYHSEPRPVYAVYTEKDKLPLKVQVCIDYLTDYFRQVAQQYQ
QHRKG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaacgactgaaaggcatgtccattttcgccaaagtggttgaattgggttcatttacg
gcggcggcgcgccagctgcaactcagcgtctcgtcggtcagtcagattgtcgccagactg
gaagatgagctgcaggtcaagctgctgaatcgcagcacgcgcagcctggggctgacagaa
gccggcaaaatctattatcagggctgtcgccgcatgctggccgaggccagccaggtgcat
gagcagctgtatgcctttaacaacacgccggtgggcattttacgcatcggctgttccacc
accatggcgcagaatgtgctttctgccatgaccagcgagatgctgcgggagtatccgggc
ctgagtgtgaacctgatgaccggcattccggcgccggatttgatcgccaacgggctggat
gtggtgattcgcgtcggagagctgcaggactccagtctgttctcacggcggctgggggcg
atgccgatggtggtgtgcgccgcgaaaagttatctggcgcagcacggcacgcccgtcaag
ccaggcgaaatcgataacttctcctggctggagtacagcgtgcgcccggataacaccttt
gagctggtggcgccggaagggctggtgacgcgcctgacgccgcagggccgctttgtcacg
aatgattcacagacgctgatccgctggctgaaagccgggtgcggcatcgcctatgtcccg
ctgatgtgggtgattgatgagattaccgccggtgagattgatatcctgtttccgcagtat
cactccgaaccccgcccggtgtatgcagtgtataccgagaaagataagctgccgcttaaa
gtacaggtgtgcattgattatctgaccgactatttccgccaggtggcgcagcagtatcaa
cagcaccgcaagggttag
DBGET
integrated database retrieval system
