Candidatus Pantoea soli: D8B20_15940
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Entry
D8B20_15940 CDS
T06714
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
pdis
Candidatus Pantoea soli
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdis03000
]
D8B20_15940
Transcription factors [BR:
pdis03000
]
Prokaryotic type
Helix-turn-helix
LacI family
D8B20_15940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_Tnp_ISL3
Hairy_orange
HTH_3
HTH_7
HTH_38
HTH_26
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QDY43275
UniProt:
A0A518XGG5
LinkDB
All DBs
Position
3420822..3421802
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AA seq
326 aa
AA seq
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MSIEKVARLAGVSKATVSRVLNQHPGVRPETRTRVLAAINVCEYQPNLLARQLRTSQSNM
LLVLISDITNPFCSRVVEGIEAEAEAQGYHILLCNTRSQLRREAAYIALLTGKVADGVIT
MDAADCLQELQGLIGESPWVQCAEYDPAIPASSVSINNREAAFETVRFLADKGRRRIALV
NCDMRYLYSHQREGGYRDALEQLDLHWSRVAYAGNITCEAGSAALRELLTGPDRPDAVFA
VSDVLAVGVVHAALEAGLRVPEDLAVVGFDGINFTSSLNPPLTTIEQPMNQLGARSVQLL
LNRIRQPHAPIVHEVLPWKRVERASS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtccattgagaaagtcgcacgccttgcgggcgtgtcgaaagcgacggtttcacgggtt
ttgaatcagcatcccggcgtgcgtcctgagacccgcacccgcgtgctggcggcgattaat
gtatgcgaataccagccaaatctgctggcgcgtcagctgcggacttctcaaagcaatatg
ctgctggtgttgatttcagatatcaccaatcccttctgttcgcgtgtggttgaaggcatt
gaggcagaggccgaagcgcagggttatcacatcctgttatgcaacacccgctcacagctg
cggcgtgaggcggcttatattgccttgctgacgggaaaagtggcggatggcgtcatcacc
atggatgctgccgattgcttgcaggagctgcaggggttgattggcgaatcaccgtgggtg
cagtgcgccgaatacgatccggcaattccggcctccagcgtcagcatcaataaccgggaa
gccgcgtttgaaaccgtgcgctttctggcggacaaaggccgccgccgcattgcgctggtt
aactgcgatatgcgctatctctactctcatcagcgcgaaggcggttaccgtgatgctctg
gagcagcttgacctgcactggagccgcgtggcctatgccggcaatatcacctgcgaagcg
ggcagcgcggcgctgcgcgaattgctgacgggcccggatcgcccggatgcggtgtttgcg
gtgtcggatgtgctggcggtcggcgtggtgcatgcggcactggaagcgggcctgcgcgtg
ccggaggatctggccgtggtgggctttgacggcatcaattttaccagcagccttaacccg
ccgctgacgacgattgaacagccgatgaatcagctgggcgcgcgcagcgtccagctgctg
ctgaaccgtatccggcagccgcacgcgcccatcgtgcacgaggtgctgccgtggaagcgc
gtggagcgcgcgtccagctga
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