Candidatus Pantoea soli: D8B20_16015
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Entry
D8B20_16015 CDS
T06714
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
D8B20_16015 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdis01007
]
D8B20_16015 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdis03016
]
D8B20_16015 (trpS)
Enzymes [BR:
pdis01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
D8B20_16015 (trpS)
Amino acid related enzymes [BR:
pdis01007
]
Aminoacyl-tRNA synthetase
Class I (G)
D8B20_16015 (trpS)
Transfer RNA biogenesis [BR:
pdis03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
D8B20_16015 (trpS)
Prokaryotic type
D8B20_16015 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Sec20
Motif
Other DBs
NCBI-ProteinID:
QDY43289
UniProt:
A0A518XGL7
LinkDB
All DBs
Position
complement(3433837..3434841)
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AA seq
334 aa
AA seq
DB search
MSKPIVFSGAQPSGELTIGNYMGALRQWVQMQDDFHCIYCIVDLHAITVRQDPAALRKAT
LDTLALYLACGIDPEKSTIFVQSHVPEHAQLSWVLNCYAYFGELSRMTQFKDKSARYEEN
INAGLFDYPVLMAADILLYQTNQVPVGEDQKQHLELSRDIAARFNALYGDVFKIPEPFIP
KSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDTKAVVKKIKRAVTDSEEPPVVRYDVKEK
AGVSNLLDILSGVTGKSIPALEQEFEGKMYGHLKGAVADAVSGMLGELQERYHRFRNDEA
FLNQVMRDGAAKARAHAQETLKKVYDAIGFVAQP
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacccatcgttttcagcggcgcccagccttccggtgaactgaccattggcaac
tatatgggtgcgctgcgtcagtgggtgcagatgcaggatgattttcactgcatttactgc
atcgtcgatctgcacgccattaccgtccgtcaggacccggccgcgctgcgcaaagccacg
cttgatacgctggcactctatcttgcctgtggtatcgatccggaaaaaagcaccatcttc
gtacagtcgcacgtgccggaacacgcgcagctgagctgggtgctgaactgctacgcctac
tttggtgagctgagccgcatgacccagttcaaggacaaatcagcccgctacgaagagaac
atcaacgccggtctgtttgattatccggtgctgatggcggcggatattctgctgtaccag
accaatcaggtgccggtgggtgaagatcagaaacagcaccttgagctgagccgcgatatt
gcggcgcgttttaatgcgctgtacggcgatgtgtttaaaattcctgagccgtttattccc
aaatcaggtgcgcgcgtgatgtcgctgctggagccgacgaaaaagatgtcgaagtcggat
gacaaccgtaacaacgttatcggcctgctggaagacaccaaagcggtggtgaagaagatc
aaacgcgcggtcacggattccgaggagccgccggttgtacgctatgacgtgaaagaaaaa
gcaggtgtctctaacctgctggatatcctctcgggcgtgaccggtaaaagtattccggcg
ctggagcaggaattcgaaggcaaaatgtatggtcatctgaaaggtgcagtggcggatgcc
gtttccggtatgctcggcgagctgcaggagcgttatcaccgcttccgcaacgacgaagcc
ttcctgaatcaggtcatgcgtgatggcgcagccaaagcgcgcgcgcatgcgcaggaaacg
ctgaaaaaggtctacgacgccatcggcttcgttgcccagccataa
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