Candidatus Pantoea soli: D8B20_16690
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Entry
D8B20_16690 CDS
T06714
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pdis
Candidatus Pantoea soli
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdis03016
]
D8B20_16690 (trmA)
Enzymes [BR:
pdis01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
D8B20_16690 (trmA)
Transfer RNA biogenesis [BR:
pdis03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
D8B20_16690 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
MTS
Cons_hypoth95
Methyltransf_15
Methyltransf_11
Methyltransf_31
PrmA
TRM5-TYW2_MTfase
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QDY43409
UniProt:
A0A518XGX9
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All DBs
Position
3589210..3590313
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AA seq
367 aa
AA seq
DB search
MTPEQLPIEQYDAQLAEKATRLQAMMAPFAAPDVEVFRSPVSHYRMRAEFRIWHDGDDLY
HIIFDQQTKQRIRVDRFPAASELINTLMPKLIDALRDNHTLRFKLFQIDYLSTLSNQIVI
SLLYHRRLEDEWTAAASALRDDLQAQGFDVQLIGRATKTKICLDRDYVDERLPVAGKEMI
YRQVENSFTQPNAAMNIQMLEWALDVTRQARGDLLELYCGNGNFSLALARNFRRVLATEI
AKPSVASAQYNIAANHIDNVQIIRMAAEEFTQAMNGVRSFNRLEGIDLNSYQCETIFVDP
PRSGLDAETVKMVQAYPRILYISCNPETLCDNLRTLSATHEVTRLALFDQFPYTHHMECG
VLLTRKA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacacccgaacagcttccgattgaacagtacgacgcgcaactggcggagaaagccacc
cgcttacaggcgatgatggcgccctttgctgcgccagacgtggaggtgtttcgctcccct
gtcagtcattaccgcatgcgcgccgaattccggatctggcacgacggtgacgatctctac
cacatcatctttgatcagcagacgaaacagcgaattcgtgtcgatcgctttccggcagcc
agcgaattaatcaacaccctgatgccgaaactgatcgatgcactccgcgataatcatacg
ctgcgttttaaactgttccagatcgactacctctctacgctgagtaatcagatcgttatt
tccctgctttaccaccgcaggctggaagacgaatggaccgccgctgccagcgcgctgcgc
gatgacctgcaggcgcaggggtttgacgtacagctgataggccgcgccacgaaaaccaaa
atctgccttgatcgggattatgtggatgagcgcctgccggtggcgggcaaagagatgatc
taccgtcaggtggaaaacagttttactcagccaaatgcggcaatgaatattcagatgctg
gagtgggcgctggatgtaacccgtcaggcgcgcggcgacctgctggaactttactgcggt
aacggtaacttttcgctggcgctggcgcgtaatttccgccgcgtgctggcaacagaaatc
gctaaaccgtcggtggcctcggcgcaatataacatcgccgcaaaccacattgataacgta
cagattatccgcatggcggccgaggagtttacccaggcgatgaacggcgtgcgcagtttt
aaccgtttagagggtatcgatcttaacagctatcagtgcgaaaccatttttgtcgatcca
ccgcgcagcgggctggatgcagagacggtaaaaatggtacaggcttatccgcgtatcctt
tatatctcctgtaatccggagacgctgtgcgacaacctgcgcacgctcagcgcaacccat
gaagtgacacgactggcgctgttcgatcagttcccgtacacccaccatatggagtgtggc
gtgctgcttacgcgtaaagcgtaa
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