Candidatus Pantoea soli: D8B20_16955
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Entry
D8B20_16955 CDS
T06714
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase RfaF
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis00540
Lipopolysaccharide biosynthesis
pdis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
D8B20_16955 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pdis01005
]
D8B20_16955 (rfaF)
Enzymes [BR:
pdis01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
D8B20_16955 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
pdis01005
]
Core region
D8B20_16955 (rfaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
UPF0180
PIN_5
Motif
Other DBs
NCBI-ProteinID:
QDY43462
UniProt:
A0A518XGY3
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All DBs
Position
3645245..3646288
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AA seq
347 aa
AA seq
DB search
MKILVIGPSWVGDMMMSQSLYRTLRAEHPDAVIDVMAPAWCRPLLSRMPEVNQALAMPLG
HGALALGERRRLGHALRASGYDRAYVLPNSFKSALVPFFAGIKRRTGWRGEMRYGVLNDV
RVLDKAAFPLMVERYVALAYDQPVRSAQQLPQPLLWPQLRVDEEEKRMTAAQFALAAGRP
IIGFCPGAEFGPAKRWPHYHYAALAEQLIAEGYQVVLFGSAKDRETGDAIVHSLSETAQA
HCKNLAGDTQLEQAVILIAHCAAVVSNDSGLMHIAAALNRPLVALYGPSSPDFTPPLSHQ
ARIIRLITGYHKVRKGDAAEGYHQSLIDIQPARVYQELSALLQPVQE
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctggttattggcccttcctgggtcggcgatatgatgatgtcgcaaagtctc
tatcgcaccctcagggccgaacatcctgacgcggtgattgacgtcatggcaccggcctgg
tgccgtccgttgctgtcgcgcatgccggaagtgaatcaggcgctggccatgccgctgggc
catggcgcgctggcgctgggtgagcggcgtcggctgggacacgcgctgcgggccagcggg
tacgatcgcgcttacgtgctccctaactcatttaaatcagcgctggtgccgtttttcgcc
ggcattaaacgccgcaccggctggcgcggcgaaatgcgttacggcgtgctcaacgatgtg
cgcgtgctggataaagcggcgtttccgctgatggtcgaacgctacgtggcgctggcttat
gaccagccggtacgctcggcgcagcagctgccgcagccgctgttatggccgcagctgcgt
gttgatgaagaagagaaacgcatgaccgcggcacagttcgcgctggccgccggacgtccg
attatcggcttctgcccgggcgcagagttcggcccggccaaacgctggccgcactaccat
tacgcagcgctggccgagcagctgatcgccgaaggctatcaggttgtgctgttcggttcc
gcgaaagatcgcgaaaccggcgacgccattgtgcacagcctgtccgaaacggcgcaggcg
cactgtaaaaatctggccggcgatacccagctggagcaggcggtaatcctgattgcccac
tgcgccgcggtggtcagcaatgattcaggcctgatgcacattgccgccgcgcttaatcgt
ccgctggtggcgctgtatggcccgagcagccctgatttcacgccgccgctgtcccatcag
gcacgcatcatccgcctgatcaccggttaccataaagtacgtaaaggtgatgcggcagaa
ggctatcaccagagtctgatcgacattcaacccgcccgcgtttatcaggagcttagcgct
ctgctgcagccggtgcaggagtaa
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