Candidatus Pantoea soli: D8B20_16995
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Entry
D8B20_16995 CDS
T06714
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis00540
Lipopolysaccharide biosynthesis
pdis01100
Metabolic pathways
Module
pdis_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
D8B20_16995
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pdis01005
]
D8B20_16995
Enzymes [BR:
pdis01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
D8B20_16995
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
D8B20_16995
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
D8B20_16995
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
D8B20_16995
Lipopolysaccharide biosynthesis proteins [BR:
pdis01005
]
Lipid A
D8B20_16995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
TetR_C_22
DUF6231
Motif
Other DBs
NCBI-ProteinID:
QDY43470
UniProt:
A0A518XGY6
LinkDB
All DBs
Position
3654179..3655453
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AA seq
424 aa
AA seq
DB search
MTTLYTALLYLIQPLIWLRLWLRGRKAPAYRKRWAERYGYCSGKVEPHGIVLHSVSVGET
LAAVPLVRALRHRYPTLPITVTTMTPTGSERAQSAFGKDVHHVYLPYDLPGSINRFLDTV
NPRLVIIMETELWPNIIRILHQRQIPLVIANARLSERSARGYKKLGGFMRDLLQRITLIA
AQNAEDGDRFLSLGLKRSHLAVTGSLKFDISVTPELAARAVTLRRQWASRRPVWIATSTH
EGEEAIVLDAHRQLLQHFPDLLLILVPRHPERFKDACDLTQKRGFSFTLRSSGEIPSGAT
QVVIGDTMGELMLLYGIADLAFVGGSLTERGGHNPLEPAAHAIPVLMGPHTWNFKDICAK
LQQAEGLITVTDAASLEKQVANLLQDDDYRRYYGRHAVEVLHQNQGALQRLLQLLEPHLP
PRAH
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacgactctctacacagccctgctctacctgattcagccactcatctggctgcgcctg
tggctgcgcggtcgaaaagcaccggcctatcgcaaacgctgggcggaacgctacggctac
tgcagcggaaaagtggaaccgcacggtattgtgctgcattcggtttccgtgggagaaacc
ctggcagccgtgccgctggtgcgggcgctgcgccatcgttatccgacgctgccgatcacc
gtcaccaccatgacgccgaccggctccgagcgcgcgcagtccgcgttcggcaaagatgtg
caccacgtttacctgccttacgacttgcccggctccatcaaccgtttcctcgacaccgtg
aatccgcgcctggtgatcatcatggaaaccgagctgtggcccaacattatccgtattctg
catcagcgccagattccgctggtgatcgccaacgcgcgcctctcagagcgctcggcccga
gggtataaaaaactcggcggtttcatgcgcgatctgctgcagcgcattacgctgattgcc
gcgcagaatgccgaagatggcgaccgttttctcagcctcgggctgaaacgttcgcacctg
gcggtgaccggcagcctcaaatttgatatttccgtcacgccggagctggcagcgcgggcc
gttacgctgcgccgtcagtgggcttcacgccgcccggtgtggatcgccaccagcacccat
gaaggtgaagaagccatcgtgctggacgcccaccgtcagctgctgcagcacttcccggat
ttgctgctgatactggtgccacgtcatccggagcgcttcaaagatgcctgcgatctgaca
caaaaacgcggtttcagcttcaccctgcgcagcagtggcgaaatcccgtccggcgccacc
caggtggtgatcggcgacactatgggtgaactgatgctgctttacggcattgccgatctg
gcgtttgtcggcggcagcctgacagaacgcggcggacataatccgctggaaccggcagcg
catgctattccggtgctgatggggccgcacacctggaacttcaaagatatctgcgccaaa
ttacagcaggccgaagggctaattaccgtcactgacgcggcctcgctggaaaaacaggtc
gccaacctgctgcaggatgatgactaccgccgctattatggtcgccatgccgtagaggtg
ctgcatcagaatcagggcgcactgcagcgtctgctacagttactcgaaccgcatttaccg
ccacgggcccattaa
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