Candidatus Pantoea soli: D8B20_17130
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Entry
D8B20_17130 CDS
T06714
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
pdis
Candidatus Pantoea soli
Pathway
pdis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D8B20_17130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdis03021
]
D8B20_17130
03400 DNA repair and recombination proteins [BR:
pdis03400
]
D8B20_17130
Enzymes [BR:
pdis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D8B20_17130
Transcription machinery [BR:
pdis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D8B20_17130
DNA repair and recombination proteins [BR:
pdis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D8B20_17130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
QDY43496
UniProt:
A0A518XHD0
LinkDB
All DBs
Position
3678519..3678794
Genome browser
AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKATVIALREIEEGLIT
NQILDVRDRQEQQEQEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaaccgttcaggacgcagtagagaaaattggtaaccgttttgacctggtg
ttggtcgctgcacgtcgtgcacgtcagatgcaggtaggcggcaaagacccgctggttccg
gaagagaacgataaagccaccgtgatcgccctgcgcgaaatcgaagaaggcctgatcacc
aaccagattctggatgttcgtgatcgtcaggaacagcaagagcaggaagccgctgaatta
caagccgttaccgctatcgctgaaggtcgtcgttaa
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