Candidatus Pantoea soli: D8B20_18385
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Entry
D8B20_18385 CDS
T06714
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
pdis
Candidatus Pantoea soli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
gpW
Hyphal_reg_CWP
Motif
Other DBs
NCBI-ProteinID:
QDY43898
UniProt:
A0A518XI86
LinkDB
All DBs
Position
unnamed1:207863..213403
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AA seq
1846 aa
AA seq
DB search
MSFKLNPIVLSLLAVPGLILPVQPIPAAIIKPFDPQKNDDKAGVFCVCNGSTQSLTGLPQ
FAAGKSGAVTTTLGQLQKEGRIFTDNLTGRERLSTGAQNFDVLIADAQNGTYTHFQAYDS
LAIAQLAPVSLSQSVTDYEDVHGAQYLDARVAQVSHGTINVALGQPGADTLANGWAMAAK
QSRLFTATQSGNINWAGDNRVTFTAIQAPAGARWAYDGDSLVTYSGNIAVTTKDGNTTRF
TITQLSDLRQYNDWLIAQLAVANLDPARYNAEFNKAFTLSTGSVVWALNTQDLHDEVLKP
TGERVVLSADGPGATATIQAGKSLEVANASGGAMRADHGATAIVNGRLAASGDALNGNEA
LVLSGNSRGINNGVINGGFFRRADGSGAEGWPAGHSENTVLVQASHFTNNGVINHAISAA
PPRGSSSALTLTDSAAAVNNGALNLGMTDVNGSGSSSAVTLAGDHARFINNGTLYLGRSA
QDRPGDSSQDRALRQSGGTFGINQFAASSAINNGQIVLGSKVQNAVAMQVSGSADAVTRN
NGVIVVNGRAQFRPAENVALQVKDAGSAGQVGNAGTITLNGDNATGLKVIATADNRAYGW
SSGVINVTGEADALNGTRNTAVWVTAEPGGTASADVSGPIRLSGRAAIGIRAEGNATVTL
APDAGLVSAGGEDQISYLADGPAARINLPAGGTYRTAGTGSTLFRYQEGADFDGRGMTLA
PDGVFSTGVIGSGAGTAVFTHGAALEIGGYATGVVIEGGAQGEIDAASRITLEQAGSTVA
MADGNKHDLTRYITNPIAHPWPGTLLVNNATINGSGAGQRALIAQNQAQLINNGSITLSG
GGSYAIQALTGGKVVNNADIAIAGDSAALYAEGYRFSGDGVTPAAIINYAALHVSAGDAP
AYAPAHGMLGVGDRAELYQNGTVTLSGSHSVAVEVDSARATLSAGSRISGDSAGQTALIA
GNGAAIFNQGSLTLGGDNSTAARLYSGGNLINSGTIEVARGIGIDVSDGNGQYTQRAGNL
HVGGGTAALRVGRNGILSIAGDGEGESYDNYPSTLWSSGGTDTVLLDSGAAGLRADHVNL
SGGSEGGRVLNNRAETADIALNYVRLDINGGTGIRSATAFDPGGHAWINVTGGGTGYLFA
NEDGSATHNDLLIGPDYYFFVSGNSTAIRASTTGRVINAGTIAIYDFSGGSAIVTRNASE
VINQGNIISLSTAAPIIDLRGGQSRFINTGTISAPFPETVVVAGGASDDQIALLAGSVTG
EVNTGNGNDSLQLSGGTLNGSVTMGSGKNQAWIEGVSLAQTRHITSDSGPGSALSFSDIT
ARGGSFSTDDRQKGTNLGSGWSTLNFYHTRWTLTDNLKLAHSTINIDPTSTLFAGNGLNP
QLSGATADSLQVNNAGMLDLTNGSGTPGNRLRINGTLASAGGQAKLNTQLRDGGTSDNLL
VQGNVSGTTLLAVTPVMSTMPVLTPPQGITLAQVTGNASTQSFALARNYVAAGPYQYGLY
ASNGETGWHYRLASNFITDSAGRAVRPALTPQMPSWISAPVALTYYNLAVTDDLHKRLGE
LRSADGAAGEMFIRYLGSALTYHTDRQSPQYGYDFDLDYSAVQLGGNLLHLDGLSDSLRA
GIAYTRGNARLRPRAADGYSSTSIDSDTLSLYATWLRDSGWYVDGALSLDWHRGDTDIAR
QQKAGKLRGNGWSTSLETGYPWPLIRGLRLTPQAQLLYQRLTLDDITDADNARIQWRAYD
QTLGRAGLQLDRSWQDAGGRTYTPYVRTSYTRGWGGAASMRAGVSDSAERVSFTSGHIGQ
MWDAGLGATAALSSDISLYAEADYRRQINGNGSAGWRYNAGMRWAF
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaattaaatccgatcgtgctcagcctgctggctgtacccggcttaatattg
cctgttcagcctatcccggccgcgataattaaacccttcgacccacaaaaaaatgatgat
aaagccggggtgttttgtgtctgtaacggcagcacccagtcactcaccggattaccgcaa
tttgccgcgggaaaaagcggggccgttaccaccaccctcggtcagttgcaaaaggaaggg
cgcattttcactgacaaccttaccggcagagagcggctgagcaccggggcgcaaaatttt
gatgtgctgattgctgacgcacaaaacggcacctatacccactttcaggcctacgattca
ctggccattgcacagcttgcgccggtttcgctcagccagtccgttaccgactatgaagat
gtgcacggcgcgcaataccttgacgcgcgcgtcgcccaggtcagtcatggcaccatcaat
gtggcactcggtcagccgggagccgacaccctggcaaacggctgggccatggccgcgaag
cagagccgcttatttaccgcaacccaaagcggcaacatcaactgggccggcgataaccgt
gtaacctttaccgccattcaggctccggctggcgcgcgctgggcgtatgacggtgacagc
ctggtgacctacagcggcaacatcgccgtgacgaccaaagacggcaacacgacccgcttt
accatcacgcaactgagtgatctgcgacagtacaatgactggctgattgcgcaactcgcg
gtcgctaatctggatccggcacgctataacgcggaattcaataaagccttcacgctctcc
accggcagcgtggtctgggccctgaatacgcaggatctgcatgatgaggtgctgaaaccc
accggcgagcgcgtggtgctgagtgcggacgggccgggggcaacggcaacgattcaggca
ggcaaatcgctggaggtcgccaacgccagcggtggggcaatgcgcgctgaccatggcgca
acggcgatcgtgaatggccgactcgccgccagcggcgatgcgctgaacggcaacgaagcg
ctggtgttaagcggcaacagtcgcggcatcaataacggtgtcatcaacggcggtttcttt
cgtcgcgccgatggcagcggcgcagagggttggccagccggtcacagtgaaaacaccgtg
ctggtgcaggcgagtcacttcaccaacaacggcgtaatcaatcatgcaatcagcgctgcg
cccccgcgcggcagcagcagcgcgctgacgctaacggattctgccgccgcggtgaataat
ggtgcccttaatcttgggatgactgacgtgaacggcagcggcagcagcagcgcggtaacg
ctggccggggatcatgcccgctttataaataacggcacgctttatctcggccgcagcgcg
caggatcggcccggcgacagcagccaggatagggccctgcgccagagcgggggcacattc
ggcattaaccagttcgctgcttccagcgccatcaacaacggtcagattgtactgggaagc
aaagtgcagaatgccgttgcgatgcaggtgagcggctctgcggatgccgttacgcgcaat
aatggcgtcattgtggtaaacggtcgcgcacagttcagaccggcggaaaatgtggcgctg
caggtgaaggatgcgggcagcgcaggtcaggtaggcaacgccggtaccatcactcttaac
ggcgacaacgccaccggactgaaagtcatcgccaccgcagataaccgcgcgtatggctgg
tcctcaggtgtgattaacgtaaccggggaggcggatgcgctgaacggcacgcgtaatacg
gcggtgtgggtcaccgctgaacccggcggcacggcctccgctgacgtcagtggccctatt
cgcctgagcggcagggcggcaatcggtatccgtgcggaaggcaacgcgacggtcacgctc
gccccggacgccgggctggtatcggcgggcggcgaggatcaaatcagttatctggctgac
gggccagcggcacggattaacctgccggcaggtggcacctaccgcaccgccggcaccggg
tcgacgctgtttcgttatcaggagggggcggattttgatggccgggggatgacgctggcg
cccgacggcgtgttttccactggcgtaatcggcagtggtgcagggaccgcggtgtttacc
catggcgcagcgctggaaatcggcggttatgctaccggggtcgtcattgaaggtggcgcg
cagggcgaaatcgacgcggcgtcgcgcatcacgctggagcaggccggcagtaccgtcgcc
atggcggatggcaacaagcacgatctgacccgttatatcaccaaccccattgcgcatccg
tggcccggcacgctgctggtgaacaatgcgacgattaacggcagcggcgccggccagcgt
gcgctgattgcacaaaatcaggcgcagcttatcaataatggcagcatcacgctcagcggc
ggcggcagttacgctattcaggcgctgacgggcggcaaggtggtgaacaacgctgatatc
gctatcgccggtgacagcgccgcgctctatgccgaaggatatcgattcagtggtgacggt
gtcacgcccgccgcgatcataaactatgcggcactgcacgtcagtgcaggcgatgccccc
gcgtatgccccggcgcacggcatgctgggtgtaggggatcgggcggaactgtaccagaac
ggcacggttacgctctctggcagccacagcgtcgcggtggaagtggacagcgcccgggca
acgttatccgccggctcacgcatcagcggcgacagtgccggccagacggcgctgattgcc
ggcaacggtgcagccattttcaatcagggcagcttaacgctggggggcgataacagcacc
gccgcgcggctttacagcggcggcaacctgattaacagcggcacgattgaggtggcgcgg
gggatcggtattgatgtcagcgacggtaacggtcagtacacacagcgtgccggcaacctg
catgtgggcggcggcaccgcggcgctgcgcgtgggaagaaatggcatcctcagcattgcc
ggcgacggtgagggcgagagctacgacaactatcccagcacgctgtggagcagcgggggc
accgatacggtgctgctggatagcggcgcagcgggattacgtgccgaccacgttaatctc
agcggcggcagtgaggggggacgtgtgctcaacaaccgggcagaaacggctgacatcgcg
ctgaattacgtccggctggatatcaacggcggcaccggtatccgctcggcgaccgccttt
gatcccggcggccacgcctggatcaacgtaaccggcggcggcaccggttatctgtttgcc
aatgaggatggttctgccacgcataatgatttgctgattggtccggactattacttcttt
gtctctggcaacagtactgccatccgcgccagtacaaccggcagggtaatcaatgcaggc
accatagccatctacgacttcagcggcggttcagcgattgtcacccgtaacgccagtgag
gtgatcaaccagggcaacattatttccctgagcaccgccgcaccgatcatcgatctgcgc
ggcgggcaaagtcgctttattaacaccggcacgatcagcgcccccttcccggaaacggtg
gtggtcgctggcggggccagtgatgaccagatcgcgctgctggcgggcagcgtgaccggt
gaagtgaataccggcaacggcaacgatagcctgcagctgtccggcggcacgctgaacggc
agtgtaaccatgggcagcggcaaaaatcaggcctggattgagggcgtcagcctggcgcaa
acccggcatatcaccagcgacagcgggccgggcagcgcgctgagtttcagcgatatcacc
gcccgcggcggctcgttcagcaccgacgacaggcaaaaaggcaccaacctgggcagcggc
tggagcacgcttaatttttatcacacccgctggacgctgaccgacaatctgaaactggcg
cacagcacgatcaatattgaccccacctccacactgtttgccggtaacggcctcaatccg
caactcagcggcgcaacggctgactcgctgcaggtcaacaacgccggtatgctggattta
accaacggcagcgggacgcctggcaatcggctgcggattaatggcacgctggcctctgcg
ggaggccaggcgaaactcaatacgcaactgcgcgacggcggcaccagcgacaatctgctg
gtgcagggcaatgtcagcggtaccacgctgctggcagtgacgccggtgatgagcacgatg
ccggtactgacgccgccgcagggcattacgctggctcaggtaaccggcaacgccagcacg
cagagttttgccctggcgcgtaattatgtcgccgccgggccttatcagtacggtttatac
gccagtaacggcgaaaccggctggcattaccggctggcctcaaatttcatcacggatagc
gccggccgtgcggtgcgcccggcgctgacgccgcagatgccgtcgtggatctccgcgccc
gttgcgctgacctactacaacctggcggtgactgacgatctgcataagcggctcggcgaa
ctgcgttccgcagacggcgcggcaggcgagatgtttattcgctatctggggtctgcactt
acctaccataccgatcgccaatcgccgcagtatggctacgattttgatctcgactacagc
gcagtccagcttggcggcaacctgctgcatctggatggactcagcgacagcctgcgggct
ggtatcgcctacacgcgcggtaatgcccgtctgcgcccgcgcgccgctgacggatacagt
tcaaccagtatcgacagcgataccctctctctgtatgccacctggctgcgcgacagcggc
tggtatgtggatggcgcgttatcactggactggcatcgcggtgataccgacattgcgcgt
cagcaaaaagcaggcaaactgcgcggcaatggctggagcacctcgctcgaaactggttat
ccgtggccgcttatccgcggcctgcgcctgacgccgcaggcacagctgctttatcagcgg
ctgacgctggacgacatcaccgatgcggataacgcgcgcattcagtggcgcgcgtatgat
cagacgctggggcgcgcagggctgcagctggaccgcagctggcaggatgcgggtggccgg
acttataccccgtatgtgcgcaccagctatacgcgcggctggggcggcgcagcctcaatg
cgtgccggcgtcagcgacagcgcagagcgcgtcagctttaccagcggccatatcggacag
atgtgggatgccggactgggggcaacggccgcgctcagcagcgatatatcactctatgcc
gaagccgactatcgccggcaaattaatggcaacggcagcgcaggctggcgttataacgcc
ggaatgcgctgggcgttttaa
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