Candidatus Pantoea soli: D8B20_20300
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Entry
D8B20_20300 CDS
T06714
Symbol
traI
Name
(GenBank) conjugative transfer relaxase/helicase TraI
Organism
pdis
Candidatus Pantoea soli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
TraI_C
TraI_2B
AAA_19
TraI_hel_assoc_N
AAA_11
NACHT
Motif
Other DBs
NCBI-ProteinID:
QDY44277
UniProt:
A0A518XJB4
LinkDB
All DBs
Position
unnamed2:50641..55767
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AA seq
1708 aa
AA seq
DB search
MLSVSSVKSAGKAGAYYTNEDNYYFLGEQSTEWYGTGAENLGLEGPVNRDTFVAVLEGQL
PDGTDMRRMEGGVNKHRPGYDLTFSAPKSASVLALVTGDTFLVDAHKEAVRRTLDEVEKL
ATTRTMTDGITEMEKTGNLVIATFMHDTSRNLDPAMHTHAVVANATLSQNGWKTLSTDIN
GKQGFTDVVWNEQVSIGALYRGHYRSIIEPAGYQTEDTGPRGEWDITGVPVKPFSSRRQD
ILDLVGEDATAKQKSMAALDSRQAKHFEDPETLREHWQTVLKDTGFDVLTFREELAERQQ
QREAESAGQEKKAATPLALEGAVREAIERLSSKSVRVTYDDVMTSVLNHVPVAPGVYGQA
RSAIDSAIGHGQLIAVDRNQTLFTTAAHVRDEARLSQLAAGLAEKRGGLTAPAGERGVLA
QVADADRAVSLIDVRGGTQFISDLNRSIMAMASESQRPLIVVAADGAARKRQQAAFGDKS
GVQLMTAEEMNSAELSPRPLVLVAEAERFNTSGLHDVLKTAAQHDGATLVTDTHARRTAG
FASAVLSAAGVKQFTASPKTENVRVTMVQKDTVEDRLSVAARYYAQEKAQGRPVSLQAGN
ARTRDQLTTRTREILADEGQLGRVLGEATVRVPVWLDASNRNDRSVYRAGMVLEYHEGQG
EKSVFTIAGVSERHNLLTLKDEKGQTQGVSISSIDSHYRLYREKKLELREGEQLRATADL
SSRAGSGERLTVTGVKAGRWLFKDTITMENAKGERVRLDRNAPLYADYAYAESFGATRRT
EGSVVAVLAGKEVNDATVNMLRRSGSDVIAFTPLDEAAIGRRLEENRPVVSVTQGIKSLA
GENELTDALRELESRKMSQPERAMRLAIEKATGTDVTFTGVRALAGVMNADRSITPARAQ
EELSRLVQRGEIFELSGEQGAAGKYISRENFENEVSILRHVAEGKNSVAPLLAGGLSGET
AAGLTEGQREAGNLILTTRDRFTAIQGYAGVGKTTQFRTVAAALAAADNAPDIRGLAPTH
RAVSELSGAGIPAQTIASFLSESSQWQAAGQARDFRNTVFVIDESSMNGNAQLASLMNVI
AEGGGRAVLSGDQDQLKSLESGAPFALALERSAADVAVMKEIVRQIPALRPAVEAVIAGN
VREAVRITADTSPQSVPRQPDAYVPESSAMDGSKLAPAAGPAGEEAEKPDLTGMIADDYA
GRTPEARDNTLIVTELNADREAINSAVHDRLQAQGALGDSVTVPLLVRVNNSNADLGRQK
FWEAQEGNVVRRGEQYFRVGETDAESGVVRMAGLDGATDRWIRPAELRKEDVAVFKEVTR
DISPGEKIRLTATDRDRNVRASDMAVVSGITEEGKILLDTGDRQLSFDPAARYADRHMDY
GYAVTTYSSQGASVKYLIGLFGEEGARGRMAALDSTYVELSRSKEHVQTYFDNLSGWAAK
VESKSGRRQTVHDVLMRAEDVRADREIQAWDKSLPVSGTRLADRVDQDLTADARFMAGKT
PEMLWPVINEHGRQRGNWHVPVSPSSGEVDFSAAHYEGAADGSRIVLQRGEKHGKVLEAA
DVAEALQLMKDNPDSPVVLSADHSERLESSRVASSATAAASGGEELDRHEAEALEKAVKA
ALGQEEKEPEPVTPEEARSAPDDRESEREAALAAALEELQVEAFDYRDYDLTSERDDRAM
MNDEVNVMRHKRSEPEPEFGHKPQKTLE
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcagtctcttctgtcaaaagcgccggtaaagccggcgcttactacaccaatgaa
gataactattactttctcggcgagcagtccacggagtggtacggcaccggtgcggaaaat
ctgggccttgagggcccggttaaccgcgatacctttgtcgcggtgctggaaggccagctg
ccggacggcaccgacatgcgccgcatggagggaggggtcaacaaacaccggccgggctat
gacctgacgttctccgcgcccaagagtgcctcggtgctcgccctcgtgaccggcgacacc
tttctggtggacgcgcacaaggaagcggtgcgccgcacgctggacgaggtggagaaactc
gccacgacgcgcaccatgaccgacggcattaccgagatggaaaagaccggcaacctggtg
atcgcaaccttcatgcacgataccagccgcaacctggacccggcgatgcacacccacgcg
gttgtggccaacgccacgctctcccaaaacggctggaaaacgctttccaccgacatcaac
gggaagcagggctttaccgacgtggtctggaacgagcaggtcagcattggcgcgctctat
cgtggccactatcgatccattattgagccagcgggctaccagaccgaggacaccgggccg
cgcggggaatgggacatcaccggcgtgccggtgaagcccttttcctcgcgtcgccaggac
attctcgatctggtcggtgaagacgcgacggcgaagcagaaaagcatggccgcgctggac
tcccggcaggccaaacactttgaagacccggagaccctgcgcgagcactggcagacggtg
ctgaaggataccggctttgatgtgctgacgttcagggaagagctggcagagcgccagcag
cagcgtgaagccgaaagcgccggtcaggaaaaaaaggccgccacgccactggcgctggag
ggcgctgtgcgcgaggccattgagcgactgtcgtctaaaagcgtgcgtgtcacctatgac
gacgtgatgaccagcgtgcttaatcacgttccggtcgccccgggcgtctacgggcaggcc
cggagcgccattgacagcgccatcggccacggccagctgattgctgtggacaggaaccag
acgctgttcaccaccgccgcccacgtccgcgacgaggcgcgcctgtcacagctggccgcc
gggctggcggaaaagcgcggcgggctgacggcaccggcgggcgagcggggggtgctggcg
caggtggccgacgccgatcgcgcggtgtcgctgattgacgtgcgcggcggcacgcagttc
atcagcgacctgaaccgcagcattatggcaatggccagcgagagccagcgtccgctgatt
gtggtggccgcagacggcgccgcgcgcaagcgacagcaggccgccttcggggacaaatcc
ggcgtacagctcatgacggcggaggagatgaacagcgctgagctgtcgccgcgcccgctg
gtgctggtcgcggaggccgagcgcttcaacacctccgggctgcacgacgtgctgaagacg
gcggcgcagcacgacggcgcgacgcttgtaaccgacacccacgcccggcgcacggcgggc
tttgcgtcggcagtgctgagcgcggcgggcgtaaaacagttcaccgcctcgccgaagacc
gagaacgtgcgcgtgacgatggtgcagaaggacacggtagaggaccggctcagcgtggcg
gcgcgctactacgcgcaggagaaagcgcagggccggccggtgtcgctgcaggcgggcaat
gcgcgcacgcgcgaccagctcacgacccggacccgggaaatcctcgccgacgaggggcag
ctcggccgggtgctgggcgaggccacggtgcgggtgccggtgtggctggacgccagcaac
cgcaacgaccgcagcgtctaccgcgcgggcatggtgctggagtatcacgaggggcaggga
gaaaagtcggtattcaccatcgccggcgtcagcgagcgccacaacctgctgaccctgaaa
gacgaaaaaggacagacgcagggcgtgagcatcagcagcatcgacagccactaccggctt
taccgggaaaagaagctggagctgcgtgagggtgagcagctgcgcgccacggccgatctc
agcagccgggccggcagcggggagcggctgaccgttaccggcgtaaaggcggggcgctgg
ctctttaaggacaccatcacgatggagaacgcaaagggcgagcgcgtcaggctcgaccgc
aacgcgccgctctacgcggattacgcctacgccgagtcttttggtgccacgcgccgtacg
gagggaagcgtggtggcggtgctggcgggcaaggaagtgaacgacgcgaccgtgaacatg
ctgcgccgcagcggctcggacgtgattgcattcaccccgctggacgaggccgcgatcggc
cgccgtctggaggaaaaccgcccggtggtcagcgtgacgcagggcattaaatcgctcgcc
ggggaaaacgagctgaccgacgcgctgcgcgagctggagtcccggaagatgtcgcagccg
gagcgcgcgatgcggctggccatcgagaaagccaccggcaccgacgtgacgttcacgggc
gtccgggcgctggccggggtgatgaacgccgaccgcagcatcacgcccgcgcgcgcacag
gaggagctgtcgcgcctggtgcagcgcggggagatttttgaactcagcggggagcagggc
gcggccgggaagtacatctctcgcgagaactttgagaacgaggtgtccatcctgcgtcac
gttgctgaaggcaaaaacagcgtggcccccctgctggccggggggctgagcggagagaca
gccgccgggctcacggagggccagcgcgaggcggggaacctcatcctgaccacccgcgat
cgctttaccgctattcagggctatgccggcgtggggaaaaccacgcagtttcgcaccgtg
gcggcggcgctcgccgccgcagacaacgctccggacattcgcgggctggcacccacgcac
cgggcggtcagcgagctgtccggggcgggtattccggcgcagactatcgcgagtttcctc
agcgaaagcagccagtggcaggccgccggacaggcgcgcgacttccgcaataccgtgttc
gtcatcgatgagtcctccatgaacggcaacgcccagctggcctccctgatgaacgtcatc
gctgaaggcggcggccgcgccgtgctgagcggggaccaggaccagctgaagtcgctggag
tccggcgccccgtttgcactggccctggagcgcagcgccgccgacgtcgcggtgatgaag
gaaatcgtgcgccagatccccgcgctcaggcccgccgtggaggcggtcatcgccggcaac
gtgcgggaggcggtgcgcatcacagcggacaccagcccgcagagcgtgccgcgccagccg
gacgcatacgtgcctgaaagcagcgcaatggacggcagcaagctggcgccggcggcaggg
cccgcaggtgaggaggccgaaaagcccgacctgaccggaatgattgccgacgactacgcg
ggccggacgccggaggcgcgcgacaacacgctcatcgtgacggagctgaacgccgaccgc
gaggctatcaacagcgccgtgcacgaccggctgcaggcgcagggcgcgctgggtgacagc
gtcacggtgccgctgctggttcgcgtcaataacagcaacgccgatctgggccggcaaaag
ttctgggaggcgcaggagggcaacgtggtgcgccggggcgagcagtatttccgggtgggt
gaaaccgacgcggagagcggcgtggtacgcatggccgggctcgacggcgcaaccgatcgc
tggatacgccctgccgaactgcgcaaggaagacgtggcggtatttaaggaggtgacgcgg
gacatcagcccgggcgagaaaatccgcctgacggccacggaccgcgaccgcaacgtgcgc
gcgagcgacatggccgtggtatcaggcatcacggaggagggaaaaattctgcttgatacc
ggcgaccggcagctgtctttcgatcccgctgcgcgctacgccgaccgccacatggactac
ggctacgccgtcaccacctacagctcgcagggcgcgtccgtgaagtaccttatcggcctg
tttggcgaagagggggcaaggggccggatggcggcgctggacagtacctacgtcgagctt
tcaaggtcaaaggagcacgttcagacctacttcgacaacctgtccggctgggcggcgaag
gtagagagtaaaagcggacggcgccagacggtgcacgacgtgctgatgcgggcggaagac
gtgcgggccgatcgggagatacaggcttgggacaaaagcctgccggtgtccggcacgcgc
ctggcggaccgggtcgatcaggacctcacggcggacgcgcgctttatggccgggaagacg
ccggaaatgctgtggccggtcatcaacgagcacggccggcagcgggggaactggcacgtt
ccggtgtcaccctccagcggagaggtggacttttccgccgcccactatgaaggggcggcg
gacggcagccgcatcgtgctgcagcgcggggaaaagcacggaaaggtgctggaagccgcg
gacgtcgcggaggcgctgcagctgatgaaggacaacccggatagccccgttgtgctctct
gctgaccacagtgaacgtctggaaagcagccgcgtcgcgtcgtctgccaccgcagcggca
tccgggggagaagagctggaccgccacgaagccgaggcgctggagaaagccgttaaagcc
gcgctaggtcaggaggagaaagagccagagccggttacgcctgaagaggcgcggagcgca
ccggacgaccgggagagcgaacgcgaggccgcactggccgccgcgctggaggaactgcag
gtggaggcatttgattaccgcgactacgacctgacgtcggagcgggacgaccgcgccatg
atgaacgatgaagtgaacgtgatgcgccacaagcgcagcgagcccgaacctgagtttggc
cataaacctcaaaaaaccctggagtag
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