Candidatus Pantoea soli: D8B20_20940
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Entry
D8B20_20940 CDS
T06714
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
pdis
Candidatus Pantoea soli
Brite
KEGG Orthology (KO) [BR:
pdis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pdis03029
]
D8B20_20940 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdis02000
]
D8B20_20940 (bamA)
Mitochondrial biogenesis [BR:
pdis03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
D8B20_20940 (bamA)
Transporters [BR:
pdis02000
]
Other transporters
Pores ion channels [TC:
1
]
D8B20_20940 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_2
POTRA_1
DUF2255
Motif
Other DBs
NCBI-ProteinID:
QDY44387
UniProt:
A0A518XJN0
LinkDB
All DBs
Position
unnamed2:189564..191990
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AA seq
808 aa
AA seq
DB search
MLFARKKYLALLMLCAPGAHASFDVKINDIKVLGLHRVSLGSVLLSTPVKPGDTVTSSDI
QETVRALFATGNFEDIQILEDNSDLIIKVKERPTVASLSFSGNKAIKNDMLEKNLDAQGI
RVGESLDNTNIVKIEKELEDFYYSVGKYSASVKAVVTPLPRNRVDLRFEFQEGTSALIKQ
INIIGNKSFKSDELISLLSLRDSLPWWNVAGDKKYQKQKLAGDLETLRSFYLDQGYAKFA
ITSTQVSLTPDKKNIYITVNINEGGRYKFSQVSLDGDFAGYESNIRRLNTIKSGEYYSQK
KITDMEKQIRDELSKHGYAYPQVVTEPRFDKSGDTVALAVHVSAGKRFYVRGVRFTGNDI
TSDRVLRREMRQTEGGWLESDKVEQGRQRLSRTGYFENVEVDTQRVPGSSDQVDLVYKVK
ERNTGSFNFGLGYGTDSGISYQVSVSQDNWLGTGNTVSFSGVKNSYQSYIEIAGTDPYFT
VDGVSLGGRLFYNNYKADKNYLSEYKQTSYGTGLTLGFPVSENSRLNSGLDFVHNSLSDM
RPQVATWNYLKGQGVLPSVSPGDEHNKAETQANDFLFTLGWNYNTLDRGFFPTAGTLFNT
SAKITVPGSDNEYYKLSADYSRYSPLTDDLDWVLMTRARVGYSAGLGGKQVPFYDTFRAG
GSSSVRGFSSNSIGPKAAYYDCSGTETDYSQCSVKNSDDAVGGNVMTTASVELIFPTPFV
GNRYADALRTSVFMDAGTVWDTSWKNTPATEMAGIPDYSKPGDFRLSAGISLQWQSPLGP
LVFSYALPLKKFSGDRTEQFQFNIGKTF
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgctttttgccagaaagaaatatttagcgctgttgatgctttgcgcaccaggggcacat
gcttcatttgatgtcaaaatcaatgatattaaagtcttaggattacatcgtgtaagcctc
ggctctgtactcctttcaactccggtcaagcctggagataccgtcacttcatcagatatc
caggaaactgttagggccttgttcgcaaccggaaactttgaagacatccagattcttgaa
gataactcagatctgattatcaaggtaaaagaacggccaaccgtggcatcattgagtttt
agcggtaataaagccattaaaaatgacatgctggagaaaaatctcgacgcgcagggtatc
agagtcggtgagtcgctggataatactaacatcgtaaaaattgaaaaagagcttgaggac
ttttactacagcgttggtaaatactcagcaagtgtaaaagcagttgttactccccttccc
cggaatagggttgatttaagatttgagtttcaggaaggcacttctgccctgattaaacag
atcaacataataggcaataaaagcttcaagagtgatgaactcatctcacttttatcccta
cgtgattctttaccatggtggaacgttgctggtgataaaaaataccagaaacaaaagtta
gccggagatttggagacactaagaagcttttatcttgatcagggatatgcaaaatttgcc
ataacttctacccaggtatccctgacgccggataaaaagaatatttatatcactgtaaat
atcaatgagggtggaagatataagttttctcaggttagccttgatggcgattttgcagga
tacgaaagtaatattcgcaggcttaacacaattaaatctggcgagtattatagccagaaa
aaaattacagacatggaaaagcagattcgggatgaactcagcaagcatggttatgcctat
cctcaggtcgtaaccgagcctcgattcgataaaagcggagacacggtggcattggccgtt
cacgtctccgccggtaaacgtttctatgtccgtggcgtccgttttactggtaatgatata
accagcgatagggtgcttagacgtgaaatgcgtcagaccgaagggggatggcttgaaagt
gataaagttgagcagggtcgccagcgtctgagccgaaccggttatttcgagaacgtagaa
gtcgatacgcagcgcgtaccaggtagcagcgatcaggttgatttggtctacaaagtaaaa
gaacgcaacacgggttcgtttaactttggtctgggctatggcactgacagtggtatcagt
tatcaggtcagtgtcagtcaggataactggcttggcacaggtaataccgtcagcttctca
ggcgtaaaaaacagctatcaatcttatatagaaattgctggcacagacccttatttcacc
gttgatggtgttagcctcggtggccgcctgttttataacaactataaagcagacaaaaat
tacctttctgagtataagcagacttcttacggaacaggtctgacccttggattccctgtc
agcgaaaacagcaggctaaactctggtctggattttgttcataactccctttctgatatg
cgacctcaggtggccacgtggaactatctgaaaggccagggggtactgccgtccgtttca
cctggtgacgagcacaataaggccgaaactcaggccaatgatttcctgttcaccttggga
tggaattacaacacccttgatcgcggatttttccctactgccggtactctttttaatacc
agcgcaaagattacggtaccggggtcagataatgaatattacaagttaagtgcagattac
agccgttacagtccattaactgacgatcttgactgggttcttatgacccgagcgcgcgta
ggctactctgctggtcttggcggtaagcaagtacctttctatgatactttccgtgccggt
ggatccagttcagtcaggggattttcttcaaacagcattggtccgaaggctgcatattac
gactgctcaggaacagaaacggactacagtcagtgtagcgttaagaactctgacgatgca
gttggcggaaatgtcatgactactgcgagtgtggagcttattttcccgacaccatttgtc
ggaaatcgctacgcagacgctttaagaacatccgttttcatggatgcaggtaccgtatgg
gatacttcatggaaaaacactccggctaccgaaatggcaggcattcctgattacagtaaa
cccggcgatttccgtttgtctgcaggcatatcgcttcagtggcagtctccacttggccca
ctggtattttcttacgccttgcctcttaaaaagttcagcggagaccgcaccgaacagttc
cagttcaacattggtaagacgttctaa
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