Pampinifervens diazotrophicum: IAE16_00125
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Entry
IAE16_00125 CDS
T11281
Name
(GenBank) DEAD/DEAH box helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
pdiz Pampinifervens diazotrophicum
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdiz03400
]
IAE16_00125
Enzymes [BR:
pdiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IAE16_00125
DNA repair and recombination proteins [BR:
pdiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
IAE16_00125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DEXQc_Suv3
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WPM32106
LinkDB
All DBs
Position
complement(24949..27177)
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AA seq
742 aa
AA seq
DB search
MAETLTVYLLKESLYSVNPPSGKLLYFTNQDNEVKSEELLRAVEVDPKIPYSFLNPIQTL
FYKLYKGGNALVSSPTSSGKSLIAYLFMKNFEGKVVYTAPTKALVKEKAVEFRTYYGKSV
EMRTGDSVLESYKEVRAKVVVSTYENLAYAFRNSSRWLQEVEAVVIDEVHQISKRWMLEE
IITACKKMDLAMLCLSATLPGLEELSEWIGANLVIKSAWRPVPLHREVMNLTKFKPIRKE
LEGEDLIAERLLSALFSLKQRGEQVILFVPKKSLGWKTIELAKEEKIGIMNQTLPFEVEE
EREPEIAFHNADIPKEEREEIEKAFREGKLQTLIATQTLAYGVNLPADRVIIFAKFFRKK
GKLKSIPDSLDILQMEGRAGRLGIREEGYSNLLVYGARDKDLQRELECALEKPFTTAVME
DAEDTALSFFLLLAHMYEGKNYENYLRNTYSFKKVSKERMERIERFLRTHGYLESYNPSQ
KGLFCIRTGIPPLSFEEFLRRRSLDLDPITTVRPLLYMKKFNGLYSFLKSAEGFLEELKV
IRGMLLPCGEECLKDNTDQLLFYVKGLTVKYPNIKNPPGEFSYLGTDALHLLRNLMEINR
HKFYRFSSIEMLQIAHALKYGIKPEYSSIAGIKGIGHIRVNMIKEVLKELNLEPPQIGVP
VENFLEMVKREDFWELLLEKLAKYRKLNPNRAKEELQRIRKTFQNNRRGYMVDDKIILAY
NLFLEGAVALKKTKRELIEVIR
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactttgaccgtctatcttctcaaagagagtttatatagtgttaatccacct
tctggaaagctactgtattttacaaaccaagacaatgaggtaaagtccgaagaactctta
agagcggttgaggtagacccaaagataccctattcttttttgaaccctattcagaccctt
ttttataagctctacaagggaggcaatgcccttgtgtcttcacccacttcctctggcaaa
agtctaatagcttatctctttatgaaaaactttgagggaaaggtggtatacaccgcaccc
acaaaggcattggtaaaggaaaaggcggttgagtttagaacctattatggtaaaagtgta
gaaatgaggactggtgatagtgtgttggagagttataaagaggttagggcaaaggtggtt
gtaagcacctatgaaaaccttgcttatgccttcaggaattcctcaaggtggttgcaagag
gtggaagcggtggtaatagatgaagtccatcaaattagtaaaaggtggatgttagaagag
ataataactgcatgtaaaaaaatggacttagccatgctgtgcctttctgcaactcttcca
ggtttagaggagttgtctgaatggataggtgcaaaccttgttataaagagtgcttggcga
cctgttccattgcacagagaagtgatgaaccttaccaagttcaaacccataagaaaagag
ctggagggtgaggaccttatagcagaaaggcttttgtccgccctgttttcactcaaacag
cgaggagaacaagttatactctttgtccctaagaaaagtcttggttggaaaacgattgaa
ttggcaaaggaagaaaaaataggcataatgaaccagacactgccttttgaagttgaagag
gaaagagaaccagagatagcttttcataatgcggacataccaaaggaagaaagggaagag
atagagaaggctttcagagaagggaaacttcaaaccctcatagctacccaaactctcgcc
tatggtgtaaatctccctgcagatagggtgattatttttgctaagtttttcagaaaaaag
ggtaagctcaaaagtatacctgacagtcttgatatactccagatggaaggaagggcagga
agacttggcataagagaagagggatactcaaaccttttggtttatggtgcaagggataag
gaccttcaaagggagcttgagtgtgcccttgaaaaaccctttactaccgcagtaatggag
gatgctgaagacactgccttgagctttttcctattgcttgctcacatgtatgagggtaaa
aactacgaaaactatctaagaaacacctactctttcaaaaaggttagcaaagaaaggatg
gagagaattgaaaggtttctaagaactcatggctacttggaaagctataacccaagtcaa
aagggactattttgtataagaaccggtataccacctcttagctttgaagagttcctcaga
agaagaagcttagaccttgaccctataaccaccgtaagaccccttttgtatatgaaaaag
tttaacgggctctatagctttcttaagtccgcagaaggctttttagaagaattaaaggta
ataagaggcatgctcctaccttgtggagaagagtgcctcaaagacaacacggaccaactt
cttttttatgtgaaaggtttaactgtgaaatatcccaacataaaaaacccacctggtgag
ttttcttaccttggcacagatgctttgcatcttttgagaaaccttatggagataaacagg
cacaagttttacaggttttcaagtattgaaatgcttcagatagctcacgctttgaagtat
ggcataaaaccagagtattcaagtattgcaggtataaagggaataggtcatataagggtt
aatatgattaaagaagttctcaaagagcttaacttagaaccaccacagataggtgtgcca
gtggaaaacttcttggagatggtcaaaagggaggacttttgggagctgttgcttgagaag
ttagcaaaatacaggaaactaaacccaaatagggctaaagaagaacttcaaaggataagg
aagacctttcaaaataaccgtagaggctatatggtggacgataagataatacttgcatac
aacctatttttggaaggtgcggtagcactcaaaaagaccaagcgagagttaatagaagtt
ataagatag
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