Pampinifervens diazotrophicum: IAE16_01390
Help
Entry
IAE16_01390 CDS
T11281
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pdiz Pampinifervens diazotrophicum
Pathway
pdiz02024
Quorum sensing
pdiz03060
Protein export
pdiz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
IAE16_01390 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
IAE16_01390 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IAE16_01390 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdiz02044
]
IAE16_01390 (ffh)
Enzymes [BR:
pdiz01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
IAE16_01390 (ffh)
Secretion system [BR:
pdiz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
IAE16_01390 (ffh)
Eukaryotic Sec-SRP protein
IAE16_01390 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
AAA_30
CbiA
AAA_16
AAA_19
AAA_17
AAA
MobB
nSTAND3
cobW
NTPase_1
AAA_7
ArsA_ATPase
YqeC
Zeta_toxin
Thymidylate_kin
AAA_33
ATP_bind_1
6PF2K
PIN
AAA_14
Motif
Other DBs
NCBI-ProteinID:
WPM32344
LinkDB
All DBs
Position
239902..241221
Genome browser
AA seq
439 aa
AA seq
DB search
MLELLTEKFSKALGRVKDTRKLTEKQVNDVLREVRAALIEADVDYEVVKGFLKRVRERAL
TEDLTNSPSPQDSFLLTIYEELVNTLGGQKQDLKKGVVLFVGLQGTGKTTSIGKIANYLK
EQGFKVSLSSTDVRRPAAMLQLQRLAEKIGIPYYGFEEGLTAVEIAKRALQKAKEEAVDY
LLLDTAGRLHVDEELMEELKQIKEAVKPSEVIYVADAMQGQSALESAKTFHELLGLTGVV
LTKMDGDARGGVALSVKEALGVGVKFIGVGEKIEDIEPFYPDRIAQRILGLGDIQTLAEK
VQKVIPEDEAQALAYKVLKGEFDLEDMLKQLRFIKNMGPLDKLLGMLPGIGAQLKGLKVE
ESKFKKTEAIILSMTKQERRNPKIINMSRKQRIAKGSGTTVSDVNKVLKDYEEMKKMIKK
LKNMQGMPQLPKFPFPFKR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgctggaactgcttactgaaaagtttagtaaggctcttggtagggtaaaagacacgaga
aagctaacagaaaaacaggtaaatgatgtgctaagggaagtaagagccgctctaatagag
gcggatgtggactatgaggtggtgaagggttttctaaagagagttcgggaaagggctttg
accgaagacctcaccaacagcccatcgccacaagatagctttttgctcacaatatacgaa
gagcttgtcaacactcttggcggtcaaaagcaagacctaaaaaagggtgtggtgcttttt
gttggacttcagggaactggtaagaccacaagcataggcaagatagccaactatctaaag
gagcaaggctttaaggtgtctttgagctccacagacgtgagaagacctgcggcgatgcta
cagcttcaaaggcttgcggagaaaataggcatcccttactacggctttgaagaaggtctt
actgcggtggaaatagccaaaagggcactccaaaaagccaaagaagaagctgtagactac
cttctccttgataccgcaggaaggcttcatgtagacgaggagcttatggaagagctaaag
cagataaaagaggcagtcaagccttcagaagttatatacgtcgcagatgccatgcagggt
cagtccgcccttgaatctgcaaaaaccttccatgagcttcttggacttactggagtagtg
cttacaaagatggatggtgatgcaagaggtggtgttgcactttctgtaaaggaagctctt
ggtgttggcgtcaagtttataggagtgggtgagaagattgaggacattgaacccttctat
cccgataggatagctcaaagaatacttggtcttggtgatatacagacccttgcggagaag
gtgcagaaggtaattccagaggatgaagcacaagcactcgcatacaaggttctcaaggga
gagtttgaccttgaggatatgcttaaacaacttaggttcataaaaaacatgggacctctt
gacaagctccttggtatgctcccaggcataggagcacagctcaaaggtttaaaggtagag
gaaagtaagttcaagaaaacagaagccataatcctctccatgacaaagcaagagaggaga
aatccgaaaataataaacatgagtaggaaacaaaggatagctaaaggtagtgggacaacg
gtctctgacgtaaacaaagtcctcaaagattacgaggaaatgaaaaagatgataaaaaag
ctaaaaaacatgcagggcatgccacagctaccaaagttccccttccctttcaaaagataa
DBGET
integrated database retrieval system
