KEGG   Pampinifervens diazotrophicum: IAE16_03090
Entry
IAE16_03090       CDS       T11281                                 
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
pdiz  Pampinifervens diazotrophicum
Brite
KEGG Orthology (KO) [BR:pdiz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pdiz03009]
    IAE16_03090 (rimO)
Enzymes [BR:pdiz01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     IAE16_03090 (rimO)
Ribosome biogenesis [BR:pdiz03009]
 Prokaryotic type
  ribosomal protein modification factors
   IAE16_03090 (rimO)
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2 CLP1_P NTPase_1
Other DBs
NCBI-ProteinID: WPM33030
LinkDB
Position
complement(522243..523511)
AA seq 422 aa
MKVGVISLGCAKNLVDTEVLLGKLKEGGARLLSDPRKADVIVINTCGFIEPAKREAIETI
LEFAEDKKVIVMGCLVQRYKEELQKEVPEVLAYFGTESWDSVVEFLGLEKKEKTQRVLTT
PKSYAYLKIAEGCNRLCSFCAIPLIRGKHRSRPIEEILEEARYLASQGVKELCIVSQDTT
YYGRDLYGKGYLIRLLSELERVEGIRWIRLLYLYPTEIEDDLLDYMQSSEKVLPYFDMPL
QHISSKVLRSMRRGYEEGFVRGLIEKVRTKLPQAVLRTTFIVGYPTEEEEGFQRLLDFVS
EGHFHWVGVFTYYQEEGTHAFSLGDPLSEKEKERRKEELLRIQEGITLGKNQELIGKELE
LLVDGFDEEFGYVPVGRIYAQAPEVDGITYVESGRELKQGDMLRVKITQVGGYDLGAVEL
EE
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgaaggtaggtgtgataagtttaggttgtgccaaaaaccttgtggacacggaggtgctt
cttggaaagttaaaggagggtggtgcaaggctccttagcgacccaaggaaggcggatgtg
atagttataaacacctgcggttttattgagcctgcaaagagagaagccatagaaaccatc
ttagagtttgcggaagacaaaaaggttatagtgatgggttgtcttgtgcaaaggtataag
gaagagctccaaaaggaagttccagaggtgcttgcctactttgggacagaaagctgggac
agtgtggtagagtttctgggattggagaagaaggagaaaactcagagggtgcttaccaca
cccaagtcttacgcatacctaaagattgcagaagggtgcaataggctttgctccttttgt
gccatacccttgataagaggaaagcaccgctccagacctattgaggaaatattagaggaa
gccagataccttgcaagtcagggcgtaaaagagctttgcatagtctcacaagacaccacc
tactacggaagagacctatacggaaagggctatcttataagactactcagcgagcttgaa
agggtagaaggcattaggtggataagacttctatacctctatcccacagagatagaggat
gacctgcttgactatatgcaaagctcagaaaaggtcctaccttactttgatatgccactg
caacatataagctctaaggttttaaggagcatgagaaggggctatgaggagggctttgta
agaggtcttatagaaaaggttcgcacaaaactgccacaggctgtcctaaggacaaccttt
atagtgggctatcccacagaggaagaagagggttttcaaaggctcttggactttgtttcg
gaggggcacttccactgggttggcgtctttacctactatcaagaggaaggcactcatgcc
ttctccttaggagacccactctcagaaaaggaaaaggaaagaaggaaagaagagctccta
agaattcaggaagggataacccttgggaaaaaccaagagcttattgggaaggagttggag
cttttggtggatggctttgacgaggagtttggctacgtgccagtgggtagaatttacgca
caagctccagaggtggatgggataacttatgtggagtctggtagagagctaaagcagggg
gatatgctaagggtgaagataactcaagtgggagggtatgaccttggggctgtggagctt
gaagaatga

DBGET integrated database retrieval system