Pampinifervens diazotrophicum: IAE16_03620
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Entry
IAE16_03620 CDS
T11281
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
pdiz Pampinifervens diazotrophicum
Brite
KEGG Orthology (KO) [BR:
pdiz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdiz02044
]
IAE16_03620
02035 Bacterial motility proteins [BR:
pdiz02035
]
IAE16_03620
Secretion system [BR:
pdiz02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
IAE16_03620
Bacterial motility proteins [BR:
pdiz02035
]
Pilus system
Pilus assembly proteins
IAE16_03620
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Gene cluster
GFIT
Motif
Pfam:
T2SSF
Bactofilin
MITRAC7_Phoenixin
Motif
Other DBs
NCBI-ProteinID:
WPM32774
LinkDB
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Position
612613..613845
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AA seq
410 aa
AA seq
DB search
MPRFRYRAFDETGSFVESEANYPTQETLIADLQQRGLSIIEVIKVDKEEKEEGKKELSFK
LPIGGKVSDRDLSIFCRQLGTMINAGLNIIDALNILGEQLPNKKLAEASKKVAVMVSEGR
PISNSMAEFPAVFPEFIVNLVRVGEETGNLDIALMRAADYYEKMAMIKSKIKSAAFYPTF
VVIIATAIVTGILYFLVPTFGEIYASLGGELPAPTQMLIAASNALRSNLIFILGFIVAFS
LIFRFLLNNSYQFRKSVHSFMLRAPKMGELVMKSTMAKFARTMATLFSSGVALEKAFEIA
GQVTGNVVIREALESAKKGVIEGEPMHKALEKTGMFPKLIIAMVRVGEDTGRLDDMLDTI
ARFYEDEFDKAVEGMIKLIEPMLIVFIGGIVGAILIALYMPIFKMGELIR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggtttaggtatagagcctttgacgagacgggaagctttgtagagagtgaagca
aactatccaactcaggaaaccttaatagcggacttacaacaaagaggtttgagtatcata
gaggtaataaaggttgataaggaagaaaaagaagagggaaagaaggaactatccttcaaa
ctcccaataggtggtaaagtaagcgatagagacctttccatattctgcagacagctcgga
actatgataaacgcagggcttaacataatagacgctcttaatatattgggagaacagctt
cctaacaaaaaacttgcggaagccagtaaaaaggtcgcggtaatggtgagcgagggaaga
cctatatctaactctatggctgagttccctgcagttttcccagagtttattgtaaacttg
gtaagagtgggtgaggaaacgggtaatcttgatattgctcttatgagggctgcagactat
tacgaaaagatggcaatgataaagagcaagataaagagcgcagctttttatcctaccttt
gtggttataatagctaccgccatagttacgggtatactctattttcttgttccaaccttt
ggagagatatatgcctctcttggtggagagcttcccgctcctactcaaatgcttatcgct
gcctctaacgcccttaggtcaaaccttatctttatacttggtttcatagtagctttttct
ttaatatttagatttttactcaacaatagctaccagtttagaaaatctgtgcattccttt
atgcttagagctccaaagatgggtgagcttgtaatgaaaagcaccatggcaaagtttgcc
agaactatggcaactctcttttcgagtggtgtagctcttgaaaaggcttttgagatagca
ggtcaggtaacgggaaacgtggtaataagggaggctcttgagtccgcaaagaagggtgtt
atagagggtgagcccatgcacaaggctcttgaaaaaactggtatgtttccaaaacttata
atagccatggtgagagtaggtgaggatacaggtaggcttgatgatatgttagatactata
gcgagattctatgaagacgagtttgataaggctgtggaaggaatgataaagctaatagaa
ccaatgcttatagtctttataggcggtatagtgggagctatactcatagccctatacatg
cccatattcaagatgggtgagttgataaggtaa
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